Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0379 ATGGCTTCAGCGGAGCAGCCTCTGAAGAAGCGAAAGCTCTACGAGCCTTTACCGGAACCGCCACCATCTTCGCCTCCGTCACCGCCGGCGGCGACAACCGAAGCAACCCCTTCCTCTCCTCAAACCCTACCCACGCCGTCCACTCCTCCGCCGCTGTCTCAGGAGGAGGTTCTCGCGAAGCGGCGCAACAAGGATGAAATTCGAAGCGTGTACGAAGGTTACAGGCGGATTAAGCGTTGCTTGCTTCAGAAAAACGCTCCCTCCTACATGTCTGAACTCGAACAGAGTTATCTCGCTCTCATCACTTCTTCCAGAGGTTGTATGAGTGTACAAAGAATTGTGGCAGATCTTATTCCTCGGTATGCATGTCACTGTCCAACTGCTTTGGAAGCTGCAGCTAAAGTTGTTATTAATATGCACAACTTGAGTTTGGGATTGATCAGCAGAGGAGAGGACTCCAGTGGTATTGCATTTGAAACTGCTAGAGCCTGTATTTGTGGCCTAGCTGATGTTTGCTGTGTTGCTTCATCGGTGGCCCAAACATCAGCTGTAATTAGAGGAATTTGCACAGCTGTTTTTCAGAATGTGCTCACCTTTTTTATAACCTTATTTGAAGGAAAGGATGTCTTACAGATGGTTGACAGGAATTTCCTGATTATGCAAGATACCCCTGAGGCCTTTTCTGAGTTGAAACAAAAGGTTTTAGATGAAGATTCATCTTCATTGACTAAACTGTGCAAGTTGCGTGCGTTATGTCTACTTTGGATATTCTTCTCTTGTCCAAAAGATTTGCTTGCAGCTTGTTTGGATCTCTTAGGCTCTACCACAAAAGAGGGAACTAATGATGAAGGACAACGTTTTCTGAGCCTGGTGACTAGCACGTTTGATGATGATAAGGAAGTTCACCTTTTGGAAAGAGCAATCGGTGGACCTAAATCATGTACAATTTCTATTAGGTCAGGCATCAGAGACAATGAGGCTGGTGAAGCAATTATGACTGTAGACAACCATGTTTCTGGTGGTGATTCATCTGTTGGCAAGAGCTGCTTGCTTATACAGGTCCTTGACATGGACCCCTCACTGCAGAAATGGATGTTGTGTAGATGTAAGAAGTTACTTGATTTACTATCCAGTGCATCACTGGAAGTTATGTCAGTACTGCAAGGAATTCTTGGAATGTTTCCTCAACAAACAGATTTGGAAGACTGTCAAGTAGATAGTGATGAAGATAAATCCGATTCTTCAATTTACATGAATAGGAACTACATGGTTCCTAGGATCTCTGAGGAACATGAAAGCATTGGTGAATCATCTGGAAAAGGAAGCAGTTTGAGAGTTCATGTTGGTTCTTCTAATGATGGTTTTACTGATAAGGTTTCTGATAAATATGTAATGGCTCATAGCTCTGCATTTTCTCTTGATAATGTTCCTGCATTAAAAGTGGGTTCGCATTATGATAATGGAGTCTCAAAGTCCATGAACACTGGGGTGGGGGAGGAAGGGAATATGTCCACACCTAGGGACTCGGTAAGCCATCAAATGTTCTCACCTACAGTTAGAACTCCAGTAGACTTTAGGAGCAATTCATTTGAAGGTAGAAATGATTTCATGAATGTAGAGAAAAATCAGGTCTTAAATATGAATTTCAATTCACCTCCACTGAGATCCTCTAGTGGATCTGTTAGTAATTCTTTGGCATCACCTAATCTTCATTTTATGTCACCAACTGCTTCAACAAAAGGTCAAATTGTCTGGTGCTGTGATGGGGATCCTGCAGCCATGGATATTGTCTCTGCTTCTAGGCAGCTATGGATAGGTTGTGTTGGTCCTGATGTGCCTGAAAGTCATATTAGGTTTCACCTAGAAAGACTTGGTCCTGTTGAACAATTTATTTTCTTCCCAGTTAAAGGATTTGCCTTGGTTGAGTACAGAAGGATCATTGACGCAATAAAAACTCGACACTGTTTACCTGGATGTTTTCCTTGCCGTGTAAAATTCATGGATATAGGACTTGGAACTAGGGGTGCAATGAATGGTGTTGCAGTTGGGTCTAGTTCTCATATTTATGTTGGAAATATTCCCAGTCAATGGGCCAGGGATGAGATCATGCATGAAACAAGGAACGTGATCCACAAGGGTCCTCTTGCATTCATTGATCTTAGCTGTGAATTTGCATTACTTATGGAATTTGAAACTCCCGAAGAAGCTACAACTGTCATGTTGCATTTGAGACAACTCCGAAGAGAAAGAAGTAACTACAACCAGTATTTTGGTCCAGGAACAGTTAATGTTGGAATTGGGCATGCTTATATGGATGGTGCGAGGCCTATACCTGCTGGGTCACCTCATGCTCGAACTCTACCAGGGAGCCCTGCTGATAGCAGTCGAACAAGGATGTCTCACTTGTCCTCCTTACTTGCTTCATTGCGTACAAAGTATAATATTAATCAAAACCTAGGTCTCAATGATAATTATATGACTGGAAATAATTGTCCTCCCATGCGTGAGGAGGATATGGTGCCATCCAGCACTTTGTGCATAACTATTCCACATAGTAGCTCTTTGTTCCTCACTGATGATGAATTAATGGCCATTTGCAATCTAGCCATTGGAAACTCTGGATCCATTGTGCAGTTGACACAAGCAAACATGCAAATGGGATGTAGTTGGTTTGTCGAATGTAGTAATGTTGATGTTAAACCAGAGAACAATTCAATGGAGCTTGTATCCCCCAGACTAAATTCTGAAAATCATAATAGTGGAATACAGGGTGCACCTCTGCCTCCGTCTAATTGGCACTTTCCTGGTTCTAGGGAGATGTCAGAGGTCGGAGCAAGGAAACCTGATGCTTATGATAATTTGTCACAGGATCCTCATCAAGGAGGTAATGTTCCGCATTCACACTCTGGAGCACATGGACCTTCCGTTCCACCACCACAACAAATTCAGTCATCTCCTTTTGTTCGCCCTGTTTATGTTCCTCCAAATGGTCCATGGGATCATCGGGGAATAAATAATCATTTACCTGTCAGCCAATTCAAGACAGGAGTAATGCCAAATAATTTTCATGGCAATTCTGTTGTCAGTCCTTTTATTCCTGCTTCAGTAACTCCACTTGCTCAGATACAAGGAACTCCAATTCATCCTTATAACCAACAGGCGCATCCATCAATTATACCACCACCTTTATCATCCTTGCCACCTCCTCAGCCTGAAATGCCACCTCCACTTCCTCCTTCTCCGCCACCTTTACCCCAGGTTCAGCCACCCCTGGTTCCTCCGCTGCCTAGTTCTCCTCCTCCCCCTCCTCCTCCACTACTGCTTGTTCAAGAACCAGTCACTATGGAATGTTCAGGGCAGTCTTTGCAGTATCAATGGCAGGGGAATCTATGTAAAAGTGGTGTTAATTACTGTACAATTTATGCATGCAAAGCAGATTCAAATATTTGTCGATATTCAAATGCCATACCTGAGCCTGCTGAGTGGCCCTCAAAATTAGACATGACAAAACGCACAGATCTTCGACATGTTAAATCAACATTTGCTGCTACTCCATCTCATAGAAGGGAAGTGTGCCGTTTGGTCCCATCTTCCACTAGTGACCACAGAAGGGATTTCATATCATACTTAAAGCAGAGGGACTGTGCTGGGGTTATTAAAATCCCAGCTTCAAAATCCATATGGGCAAGGCTGCTATTCATTCTCCCCCACTCACTTGAAACGTGCTCTTTGCTTTCTATTGCACCTGATCAGTCAGATTGCCTCATTGCTTTGGTCTCGGCGAGGCACGGCGAGTCCCGACGAGGTCGAGGCGTCCCGGTGGTGAGGTCGTGGCGGCGTCGTGAGGGAGAAGCGGATCGATCGCGCGAGGAGAAGAGGGAGAAGCGGATCGATCGCGCGAGGAGAAGAGGGAGAAGCGGATCGATTGCGCGAGGGAGAAGGAGCAGATCGATTGCGCGAGGGAGAAGAAGGAGCAGATCGATTGCGCGAGGGAGAAGAAGGAGCAGATCGAGTACTGCCGTCCGGTGGGGTTCCGGCGAGAACTCTGACGGGGTCTCGGTGGGGTTCGGCTGGCTTGGTGGTGAGCTTTGTGGAGGAAAGGGAGAACGCGAGGGAGGAGGAGGAGGAGAAGAGCATTTCTATTTGGATTTTTGGTTATGTTTCTAA 4167 0.4497 MASAEQPLKKRKLYEPLPEPPPSSPPSPPAATTEATPSSPQTLPTPSTPPPLSQEEVLAKRRNKDEIRSVYEGYRRIKRCLLQKNAPSYMSELEQSYLALITSSRGCMSVQRIVADLIPRYACHCPTALEAAAKVVINMHNLSLGLISRGEDSSGIAFETARACICGLADVCCVASSVAQTSAVIRGICTAVFQNVLTFFITLFEGKDVLQMVDRNFLIMQDTPEAFSELKQKVLDEDSSSLTKLCKLRALCLLWIFFSCPKDLLAACLDLLGSTTKEGTNDEGQRFLSLVTSTFDDDKEVHLLERAIGGPKSCTISIRSGIRDNEAGEAIMTVDNHVSGGDSSVGKSCLLIQVLDMDPSLQKWMLCRCKKLLDLLSSASLEVMSVLQGILGMFPQQTDLEDCQVDSDEDKSDSSIYMNRNYMVPRISEEHESIGESSGKGSSLRVHVGSSNDGFTDKVSDKYVMAHSSAFSLDNVPALKVGSHYDNGVSKSMNTGVGEEGNMSTPRDSVSHQMFSPTVRTPVDFRSNSFEGRNDFMNVEKNQVLNMNFNSPPLRSSSGSVSNSLASPNLHFMSPTASTKGQIVWCCDGDPAAMDIVSASRQLWIGCVGPDVPESHIRFHLERLGPVEQFIFFPVKGFALVEYRRIIDAIKTRHCLPGCFPCRVKFMDIGLGTRGAMNGVAVGSSSHIYVGNIPSQWARDEIMHETRNVIHKGPLAFIDLSCEFALLMEFETPEEATTVMLHLRQLRRERSNYNQYFGPGTVNVGIGHAYMDGARPIPAGSPHARTLPGSPADSSRTRMSHLSSLLASLRTKYNINQNLGLNDNYMTGNNCPPMREEDMVPSSTLCITIPHSSSLFLTDDELMAICNLAIGNSGSIVQLTQANMQMGCSWFVECSNVDVKPENNSMELVSPRLNSENHNSGIQGAPLPPSNWHFPGSREMSEVGARKPDAYDNLSQDPHQGGNVPHSHSGAHGPSVPPPQQIQSSPFVRPVYVPPNGPWDHRGINNHLPVSQFKTGVMPNNFHGNSVVSPFIPASVTPLAQIQGTPIHPYNQQAHPSIIPPPLSSLPPPQPEMPPPLPPSPPPLPQVQPPLVPPLPSSPPPPPPPLLLVQEPVTMECSGQSLQYQWQGNLCKSGVNYCTIYACKADSNICRYSNAIPEPAEWPSKLDMTKRTDLRHVKSTFAATPSHRREVCRLVPSSTSDHRRDFISYLKQRDCAGVIKIPASKSIWARLLFILPHSLETCSLLSIAPDQSDCLIALVSARHGESRRGRGVPVVRSWRRREGEADRSREEKREKRIDRARRRGRSGSIARGRRSRSIARGRRRSRSIARGRRRSRSSTAVRWGSGENSDGVSVGFGWLGGELCGGKGEREGGGGGEEHFYLDFWLCF 1388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0379 1388 MobiDBLite consensus disorder prediction 1279 1347 - -
Aed6g0379 1388 Pfam SPOC domain 1120 1258 IPR012921 -
Aed6g0379 1388 SUPERFAMILY RNA-binding domain, RBD 590 660 IPR035979 GO:0003676
Aed6g0379 1388 Gene3D - 592 673 IPR012677 -
Aed6g0379 1388 MobiDBLite consensus disorder prediction 1060 1104 - -
Aed6g0379 1388 PANTHER NUCLEIC ACID BINDING PROTEIN 1 1259 - -
Aed6g0379 1388 MobiDBLite consensus disorder prediction 1046 1104 - -
Aed6g0379 1388 MobiDBLite consensus disorder prediction 916 994 - -
Aed6g0379 1388 MobiDBLite consensus disorder prediction 1 59 - -
Aed6g0379 1388 MobiDBLite consensus disorder prediction 1306 1337 - -
Aed6g0379 1388 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 1 1259 - -
Aed6g0379 1388 MobiDBLite consensus disorder prediction 17 33 - -
Aed6g0379 1388 MobiDBLite consensus disorder prediction 490 513 - -
Aed6g0379 1388 MobiDBLite consensus disorder prediction 1279 1305 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0379 K18667 - gmx:100780367 1774.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0379 6 3279699 3293828 Aed6g0379 6 3279699 3293828 ECH