Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0323 ATGCAGTTCCAACATTGTAAGCGACTGAGTGATAGATCTTTGGACATGATTCGGGCCATACGTGCTTGCAAGACGGCAGCAGAAGAACGAGCTGTTGTAAGAAAAGAATGTGCTGCCATTCGTGCTGCAATAAACGAAAATGATAATGACTATAGGCATCGGAACCTGGCTAAGCTAATGTTCATCCACATGCTTGGTTACCCCACACATTTTGGTCAAATGGAATGCCTCAAGTTGATAGCTTCTCCTGGATTTCCAGAGAAAAGAATAGGTTATCTTGGCCTCATGTTGCTTCTTGATGAAAGACAAGAAGTTCTAATGTTGGTCACCAATTCCTTGAAACAAGATCTTAATCACATAAATCAGTATATAGTGGGACTTGCTCTTTGTGCTTTAGGAAACATTTGTTCAGCAGAAATGGCTCGTGATCTTGCACCAGAGGTTGAGAGATTGCTGCAATTTCGAGATCCAAATATTCGGAAGAAGGCAGCATTATGCTCTATAAGGATCATAAAGAAAGTTCCAGACTTGGCAGAAAATTTTATCAATCCTGCTACCTCCTTACTCAGGGAGAAGCATCATGGGGTTTTGATCACTGGGGTTCAGCTTTGTACAGATCTGTGTAATATTAGCCCTGAAGCTCTTGAACATATTAGGAAGAAATGCACAGATGGTTTGGTTAGAACTCTTAAGGATCTAGCCAATAGTCCATACTCACCAGAGTATGATATTGCTGGTATCACAGACCCATTTCTTCACATCAGATTGCTTAAACTTTTGCGAGTGTTGGGTGAAGGCAATGCTGATGCTAGCGACTCCATGAATGACATACTTGCCCAGGTGGCTACGAAGACCGAGTCAAATAAAGTTGCAGGAAATGCTATTTTATATGAATGCGTTCAAACAATAATGAGCATTGAAGATAATGGTGGCTTACGTGTACTTGCCATTAATATCCTGGGAAGATTCTTGTCAAACCGTGACAACAATATCAGATATGTGGCATTAAACATGCTAATGAAGGCTGTAACTGCTGATGCTCAGGCAGTACAGAGGCACCGGGCAACAATTATAGAATGTGTGAAGGATTCGGATGCTTCGATTCGGAAAAGAGCCCTTGCACTAGTTTATGTTTTGGTGAATGAGACTAATGTGAAGCCCTTGGCAAAAGAGCTTATAGATTATCTCGAAGTCAGTGACCTTGATTTCAGAGGGGACCTTACTGCCAAAATTTGCTCCATTGTAGCAAAGTATTCCCCAGAGAAGATCTGGTACATTGATCAGATGCTCAAGGTTCTGTCTGAGGCTGGAAATTTTGTAAAAGATGAAGTATGGTATGCCTTAATTGTTGTGATAAGCAATGCTTCTGAGCTTCATGGATATACAGTAAGAGCATTATACAGAGCATTTCAAACGTCAGCTGAACAGGAGACTCTAGTTCGAGTTACAGTGTGGTGCATTGGGGAGTATGGTGACATGTTAGTCAATAATGTTGGAATGCTTGACATAGAAGATCCAATAACAGTGACTGAGTCCGATGCAGTTGATGTCGTAGAGATTGCTATAAAACGCCATGTGTCAGATCTTACCACAAAAGCGATGGCTTTGGTTGCACTTTTAAAGCTCTCTTCACGTTTCCCTTCATGTTCAGAGAGGATCAAAGAAATTATTGTTCAGTTCAAAGGGAACTTTGAGCTAGAATTGCAGCAGAGAGCTATTGAATTCAATTCGATTATTGCAAAGCATCAAAGTATTAGGTCTACACTCGTAGAAAGGATGCCAGTTTTGGATGAGGCAACTTTCATTGGTAGGAGGGCTGGGTCTCTGCCAGGCGCAGCTTCAACTCCAACTGCACCTTCATTTAATCTTCCAAATGGAGTAGCCAAACCTGTGGCTCCTCTTGTGGATCTACTTGATCTAAGTTCAGATGATGCTCCTGCACCTAGCTCTTCTGGTGGAGGAGATATATTTCAGGACCTTCTTGGTGTTGATCTGTCACCAGCATCACAACGACCTGTAGAAAACAATGGACCAGTTTATCCATCAGTAACGGCATTTGAGAGCAGCTCCTTGAGGTTGACATTGAATTTCTCAAAACAACCAGGAAACCCACAAACAACAGTTATCCAGGCCACTTTTATGAATTTGTCCTCCAATACATATACAGATTTTGTTTTCCAAGCAGCAGTTCCTAAGTTTCTTCAATTGCACTTAGATCCAGCTAGCAACAATACTCTTCCCGCAAATGGGTCCATAACCCAAAGTTTGAAAATTACTAATAGCCAGCATGGGAAGAAATCTCTTGTCATGCGTATAAGGATAGCGTACAAGATAAATGGCAAGGATACACTGGAGGAAGGACAAGTCAGTAATTTTCCTCGTGGTTTATGA 2391 0.4153 MQFQHCKRLSDRSLDMIRAIRACKTAAEERAVVRKECAAIRAAINENDNDYRHRNLAKLMFIHMLGYPTHFGQMECLKLIASPGFPEKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHINQYIVGLALCALGNICSAEMARDLAPEVERLLQFRDPNIRKKAALCSIRIIKKVPDLAENFINPATSLLREKHHGVLITGVQLCTDLCNISPEALEHIRKKCTDGLVRTLKDLANSPYSPEYDIAGITDPFLHIRLLKLLRVLGEGNADASDSMNDILAQVATKTESNKVAGNAILYECVQTIMSIEDNGGLRVLAINILGRFLSNRDNNIRYVALNMLMKAVTADAQAVQRHRATIIECVKDSDASIRKRALALVYVLVNETNVKPLAKELIDYLEVSDLDFRGDLTAKICSIVAKYSPEKIWYIDQMLKVLSEAGNFVKDEVWYALIVVISNASELHGYTVRALYRAFQTSAEQETLVRVTVWCIGEYGDMLVNNVGMLDIEDPITVTESDAVDVVEIAIKRHVSDLTTKAMALVALLKLSSRFPSCSERIKEIIVQFKGNFELELQQRAIEFNSIIAKHQSIRSTLVERMPVLDEATFIGRRAGSLPGAASTPTAPSFNLPNGVAKPVAPLVDLLDLSSDDAPAPSSSGGGDIFQDLLGVDLSPASQRPVENNGPVYPSVTAFESSSLRLTLNFSKQPGNPQTTVIQATFMNLSSNTYTDFVFQAAVPKFLQLHLDPASNNTLPANGSITQSLKITNSQHGKKSLVMRIRIAYKINGKDTLEEGQVSNFPRGL 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0323 796 SUPERFAMILY ARM repeat 28 596 IPR016024 -
Aed6g0323 796 Gene3D - 3 597 IPR011989 -
Aed6g0323 796 SMART alpha_adaptinc2 675 793 IPR008152 GO:0006886|GO:0016192
Aed6g0323 796 PIRSF AP1_gamma 10 655 IPR017107 GO:0005794|GO:0016192|GO:0030121
Aed6g0323 796 PIRSF AP1_gamma 656 796 IPR017107 GO:0005794|GO:0016192|GO:0030121
Aed6g0323 796 Pfam Adaptin N terminal region 30 581 IPR002553 GO:0006886|GO:0016192|GO:0030117
Aed6g0323 796 SUPERFAMILY Clathrin adaptor appendage domain 635 795 IPR013041 -
Aed6g0323 796 Pfam Adaptin C-terminal domain 681 793 IPR008152 GO:0006886|GO:0016192
Aed6g0323 796 Gene3D - 656 794 - -
Aed6g0323 796 ProSiteProfiles Gamma-adaptin ear (GAE) domain profile. 678 793 IPR008153 -
Aed6g0323 796 PANTHER AP-1 COMPLEX SUBUNIT GAMMA 679 795 - -
Aed6g0323 796 PANTHER AP-1 COMPLEX SUBUNIT GAMMA 10 676 - -
Aed6g0323 796 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 679 795 - -
Aed6g0323 796 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 10 676 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0323 Aed-Chr6 2827547 2839422 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0323 K12391 - gmx:100815152 1322.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0323 6 2827547 2839422 Aed6g0323 6 2827547 2839422 ECH