Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0314 ATGGCGGATTCCGCCTCTTCCCCCGCAACCCTACCTCCCTCCAATCCCCAACCCTCCGAATCCGCCGCACCGGATCCACTTCCCCAATCCTCAACACTGCCCTCTTCCACGCCTCTCACCACAAACCCTAATCCCAATCCAACGCTGCTCCCTCCTCCTCCGCCGCCGCCCACTCTCCTCTTTCCGGCGGGCATTCCGCCGCAGGTCCCCGGCGTCCTCCCTCCCTCATTCCGCCCGCTCGCGCCTCAATTCTCCCCCGTCCCCGTGCCGAATCCGGTATACCAAAACCCCGCCGTGCCGCCGCCCGGCGTGGCTGGGCCGGTTCCGCTGCCGCAGATGCAGCCGATGATGTCGTATCAGGTTCAACACGGTAACCCGACCATGCGTCCCTTCGCTCCGATCCCTAACGGCTACGCCGCAGCTCCCGCGGGAATCCCTCGTTACCCCCCTCCTTATGGAACTATGGTTCGTCCCATATTTCCTCCACGACCTCCAGGAGCAATTAACATACCTACAGTATCACGACCACCTGTTGCAGGGATCCCTTTAGTTCGCCCAATTATTCCTCCTATTGTCAGACCTGTGGTAGCCCCTAGTGTTACTCCAGCCGAGAAGCCTCAAAACACGGTTTACATTGGCAAGATTGCACCATCTGTGGAAAATGAGTTCATGCTCTCTCTTCTTCAATTATGTGGAACTATCAAGACCTGGAAACGTCCTCAGGATTTATCAACTGGAACTCCTACAAGTTTTGGGTTTTATGAGTTTGAGTCTGCAGAAGGGGTTCTCCGTGCCTTACGTCTCCTTACTAAACTGAATATTGATGGGCAAGAACTGAAGGTCAATGTGAATCAAGCTATGAAAGAAAATCTGGAGCATTATGTTAAGACAAAAACTGAGAACTTGAAGAACAAAGAAACTCAGGCAGGAGTTGGTGAAAAAGACGAAGGTGAACAACCTTCTAATGCAAACGAGGATGCAAATGATGACACAGAGCCCTCAAATAAAGAGGCTAGTGAATCATCAAACAAGGAATCCCATGATGTGGCAAACTTTGGGATTGTCACTGATGAAGATAGAGAAGCTGATCGTGAAGCTTTAGAAAAGATCACAAAGATGTTAGAGGAAAGATTGAAGACTAGACCTTTGCCTCCACCACCTGCACAGCCAACTGGTGATGGTTCTGTGAATTTAACTTCAGAACAACCTGTTAAAACAAGAGATGGGGACTCTGCTGTGGATACAGAGAAGAATGAATCTGCTGAAAATAAAAATGAGAAAGAGACAAACAATGATAACAAACCAACCAGTGAACATGAAAGGACTGAAAGCCCTGATAGAAGGCATGATAGAAAAAGCAGAGAAAGGGACCGAGATAGGGAGCTAAAACGAGATAAGGATAGAGAACTTGAAAGATATGAAAGAGAAGCAGAGCGGGAACGTGTTCGGAAAGAGAGGGAACAAAGACGAAGAGTTGAGGATGCTGAGCGTCAGTATGAAACATATTTGAAGGATTGGGAGTATAGAGAACGAGAAAAAGAGAAAGAGCGCCAGTATGAAAAAGAGAAGGAGAAGGAAAGGGAACGTAAAAGGAGAAAGGAGATACTTTATGAAGATGAGGATGAGGATGAAGATTCTAGGAAGAGGTGGCGCAGAAGTGCGATAGAGGAGAAGAGAAAGAAGAGGCTGCGTGAGAAGGAAGATGACCTGGTTGACCGACAAAAAGAAGAAGAAGAAATTGCTGAGGCCAAAAAGAAGGCTGAGGAGGAACAAAAGCAACAAAGAGATGCATTAAAGCTATTATCTGAGCATGTGATCAATGGTGGTAATGAAAATATGAATACTGAAGAGATTACTAATGAAGTTAAAAGCATTGTTGCTGAACAAGATACTGTAGCTGATTATAGTCGTGAAGATCATTTTGGTGGCGGTAATTCAATAAATGTCTTCAATGATGAATCAACCATAGCATCTGTTGCTCCAATTGATGCACAGTCAGGTGGCAATGCTCCTACAAAGAAATTGGGGTTTGGTCTAGTTGGTTCAGGAAAAAGAACATCTGTCCCTTCTGTTTTCCATGAAGAGGATGATGATGATGCACACAAGGACAAAAAAATGAGGCCATTGGTTCCAATTGATTACTCAACTGAAGAATTGCAGGCTGTTCAACCTACGGGTTCTGGGCCAACACCACCCAATTTGGCTGCTGCTGCAGAATTTGCAAAGCGTATATCCAGTACAAATTTCAAGGAAGAGAAGCTGGATGGAGAACGGGATAGAAGCAGGCGTTCAAATGAGAAGTCTAACCACCGGGACAGGAGTGATGAAGATGGCACTCACCGAGATGAAAACAAGGAGAGAATTCCTGGCCGTGACAGGGACCGAGATCATGGGTCGGAGAAACTCAAGACTTCTGATAATAAGAGGCTTTTGGATGCAAAACAATTGATTGATATGATACCAAAGACCAAGGAGGAGTTGTTCTCATATGAGATAGACTGGACAGTGTATGATAAGCATCAATTACAAGAAAGAATGAGACCATGGATTTCAAAGAAAATCAAAGAGTTTTTGGGCGAAGAAGAAACTACATTGATAGATTATATTGTTTCCAGTACACAAGAGCATGTGAAAGCATCACAAATGCTTGAGCGTCTTCAGATTATTTTGGATGAAGAGGCTGAAATGTTCGTTCTGAAGATGTGGAGGATGCTTATCTTTGAAATAAAGAAGGTAGAATCAGGACTAGCTTTGAGGTCAAAATCCTGA 2769 0.4558 MADSASSPATLPPSNPQPSESAAPDPLPQSSTLPSSTPLTTNPNPNPTLLPPPPPPPTLLFPAGIPPQVPGVLPPSFRPLAPQFSPVPVPNPVYQNPAVPPPGVAGPVPLPQMQPMMSYQVQHGNPTMRPFAPIPNGYAAAPAGIPRYPPPYGTMVRPIFPPRPPGAINIPTVSRPPVAGIPLVRPIIPPIVRPVVAPSVTPAEKPQNTVYIGKIAPSVENEFMLSLLQLCGTIKTWKRPQDLSTGTPTSFGFYEFESAEGVLRALRLLTKLNIDGQELKVNVNQAMKENLEHYVKTKTENLKNKETQAGVGEKDEGEQPSNANEDANDDTEPSNKEASESSNKESHDVANFGIVTDEDREADREALEKITKMLEERLKTRPLPPPPAQPTGDGSVNLTSEQPVKTRDGDSAVDTEKNESAENKNEKETNNDNKPTSEHERTESPDRRHDRKSRERDRDRELKRDKDRELERYEREAERERVRKEREQRRRVEDAERQYETYLKDWEYREREKEKERQYEKEKEKERERKRRKEILYEDEDEDEDSRKRWRRSAIEEKRKKRLREKEDDLVDRQKEEEEIAEAKKKAEEEQKQQRDALKLLSEHVINGGNENMNTEEITNEVKSIVAEQDTVADYSREDHFGGGNSINVFNDESTIASVAPIDAQSGGNAPTKKLGFGLVGSGKRTSVPSVFHEEDDDDAHKDKKMRPLVPIDYSTEELQAVQPTGSGPTPPNLAAAAEFAKRISSTNFKEEKLDGERDRSRRSNEKSNHRDRSDEDGTHRDENKERIPGRDRDRDHGSEKLKTSDNKRLLDAKQLIDMIPKTKEELFSYEIDWTVYDKHQLQERMRPWISKKIKEFLGEEETTLIDYIVSSTQEHVKASQMLERLQIILDEEAEMFVLKMWRMLIFEIKKVESGLALRSKS 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0314 922 Gene3D PWI domain 801 917 - -
Aed6g0314 922 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 208 286 IPR000504 GO:0003723
Aed6g0314 922 MobiDBLite consensus disorder prediction 297 362 - -
Aed6g0314 922 PRINTS Proline rich extensin signature 125 142 - -
Aed6g0314 922 PRINTS Proline rich extensin signature 55 67 - -
Aed6g0314 922 PRINTS Proline rich extensin signature 70 91 - -
Aed6g0314 922 PRINTS Proline rich extensin signature 16 28 - -
Aed6g0314 922 PRINTS Proline rich extensin signature 31 47 - -
Aed6g0314 922 PRINTS Proline rich extensin signature 100 116 - -
Aed6g0314 922 MobiDBLite consensus disorder prediction 375 494 - -
Aed6g0314 922 MobiDBLite consensus disorder prediction 678 712 - -
Aed6g0314 922 PANTHER SPLICING FACTOR PWI DOMAIN-CONTAINING PROTEIN / RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN 5 922 - -
Aed6g0314 922 PANTHER SPLICING FACTOR PWI DOMAIN-CONTAINING PROTEIN / RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN 5 922 - -
Aed6g0314 922 SMART rrm1_1 209 282 IPR000504 GO:0003723
Aed6g0314 922 MobiDBLite consensus disorder prediction 40 63 - -
Aed6g0314 922 MobiDBLite consensus disorder prediction 746 807 - -
Aed6g0314 922 MobiDBLite consensus disorder prediction 392 406 - -
Aed6g0314 922 CDD RRM_RBM25 209 289 IPR034268 -
Aed6g0314 922 MobiDBLite consensus disorder prediction 689 711 - -
Aed6g0314 922 SUPERFAMILY PWI domain 843 910 IPR036483 GO:0006397
Aed6g0314 922 Pfam PWI domain 845 908 IPR002483 GO:0006397
Aed6g0314 922 Coils Coil 560 604 - -
Aed6g0314 922 SMART pwi_2 838 911 IPR002483 GO:0006397
Aed6g0314 922 ProSiteProfiles PWI domain profile. 825 922 IPR002483 GO:0006397
Aed6g0314 922 MobiDBLite consensus disorder prediction 510 549 - -
Aed6g0314 922 MobiDBLite consensus disorder prediction 24 39 - -
Aed6g0314 922 MobiDBLite consensus disorder prediction 407 494 - -
Aed6g0314 922 Coils Coil 456 505 - -
Aed6g0314 922 MobiDBLite consensus disorder prediction 563 595 - -
Aed6g0314 922 MobiDBLite consensus disorder prediction 1 63 - -
Aed6g0314 922 MobiDBLite consensus disorder prediction 329 344 - -
Aed6g0314 922 SUPERFAMILY RNA-binding domain, RBD 182 285 IPR035979 GO:0003676
Aed6g0314 922 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 210 280 IPR000504 GO:0003723
Aed6g0314 922 Gene3D - 200 315 IPR012677 -
Aed6g0314 922 Coils Coil 288 308 - -
Aed6g0314 922 MobiDBLite consensus disorder prediction 297 321 - -
Aed6g0314 922 Coils Coil 508 536 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0314 K12822 - gmx:100809428 1322.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0314 6 2739064 2745644 Aed6g0314 6 2739064 2745644 ECH