Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0310 ATGAACAAACAACTCACGCTGCTCTGTCTCTTTATCCTCTTCTCCTCATTTCTCAGTGTTGGTTTCGCCGGAGACGCGGCGGAGAAAAACCCGTTCACTCCGAAAGCCTTCGCGATTCGGTATTGGGACAAAGAGATCCGCAGCGGGTTGACGAAGCCGCCGTTTCTTCTGTCCAAGGCGTCGCCGCTGAACGCGGCGGAGGCGGCGACGTTCGCCAAGCTCGCCGCCGGGAATGCGCTCTCCACTAAGCTGCCGGAATTCTGCGCCGCCGCGAAGCTCCTATGCTTTCCGGCGCTGGGGCCCAGCCTCGAGAAGCATGACAAAGACGCGAACTTTGCTGTGTACAGAGACAAGAACTTCACCAACTACGGAACGGGTCGACCCGGTGGGTTCGACTCGTTTAAAAACTACTCCGAGGGGGAGAATATTCCGGTGAACGAGTTCCGGCGATACAGCCGCGACTCCGCCGGCCACAACGACGGGTTTTTGAGCTACGGGACCGACGGGAACGTTGTGCAGCAGAGCTTCCACACATACGCCGCCGGAGCCACCGGAGGCGCCGGCGAGTTCAAGCACTACGCCGACGAAACCAACGTCCCCAACCTCGGGTTCACCTCCTACTCCGACAGCGCCAACGGCAGAACCCAATCTTTCTCTTCCTACTCAGAAAATGGCAATGCCGGCGAGCAGACATTCACCTCGTACGGCAAAAACGGCAACGGCCCGACCAACGTGTTCGCCTCCTACGGAACAGAGTCCAACGTTGTCGGGTCCGGGTTCTCCAACTACGCCGAGACCGCCAACGCCGCCAACGACACCTTTAAGGGCTACGGCGTGGACATGAACAACCCCACCAACACGTTCTCCAACTACGCCGCGGGAGGAAACGGCGCCGTGGAGAAATTCTCCAGCTACCGCGACAAGGCCAACGTCGGCGCCGACTCCTTCACCTCGTACGCCAAATCCGCCAACGCCGCCGACATCGGATTCTCCAACTACGGCAAGTCCTTCAACGAAGGCACCGACAGCTTCACCTCGTACGCCAAATCCTCCGACGGCGAAACAAAAGTGGGGTTCACTTCCTACGGCGTGAACAACACCTTCAAGGACTACGAGAAAAAGGGTACAACAGTGTCCTTCGCCAGGTACACCAACATCAGCACAACCCTGAGCGCTTCAGCTTCAGAAGCAGCAATTAGTGGCAGTTTGGTAAATAAGTGGGTGGAGCCGGGTAAATTCTTTAGAGAGAAGATGATGAAGGAAGGGATCGTGATGCCTATGCCTGACATAAAAGATAAAATGCCGGAAAGGTCGTTTTTGCCCCGGAGCATTCTGTCCAAACTACCCTTTTCTGTTTCGAAGATCGACGAGTTGAAGCAAGTCTTCAAGGCTTCGGATAACGGCTCAATGGAGAAGATGATGAGGGATTCGTTGGAGGAGTGCGAGCGTGCGCCCAGTCGCGGCGAGACGAAACGCTGCGTTGGGTCGCTCGAGGACATGATCGACTTTGTAACCTCCGTTCTGGGCCGAAACGTCGCCGTTCGGAGCACCCATAACGTGAACGGGTCCAAGAAGAGCGTGATGGTGGGGCCCGTTACAGGAATCAACGGTGGTAAAGTCACCCAATCCGTGTCGTGCCACCAGAGCCTGTACCCTTACCTGCTCTACTACTGCCACGCGGTTCCTAAGGTTCGGGTCTACGAAACGGATCTTCTCGACCCGAAAACAAAGACCAAGATTAACCGCGGAGTTGCCATCTGTCATTTAGACACCTCGGATTGGAGCCCCACCCACGGAGCGTTCCTCTCGCTCGGCTCGGGTCCGGGTCGGATCGAGGTGTGTCACTGGATCTTCGAGAACGACATGGCGTGGACCATCACTGATTGA 1887 0.567 MNKQLTLLCLFILFSSFLSVGFAGDAAEKNPFTPKAFAIRYWDKEIRSGLTKPPFLLSKASPLNAAEAATFAKLAAGNALSTKLPEFCAAAKLLCFPALGPSLEKHDKDANFAVYRDKNFTNYGTGRPGGFDSFKNYSEGENIPVNEFRRYSRDSAGHNDGFLSYGTDGNVVQQSFHTYAAGATGGAGEFKHYADETNVPNLGFTSYSDSANGRTQSFSSYSENGNAGEQTFTSYGKNGNGPTNVFASYGTESNVVGSGFSNYAETANAANDTFKGYGVDMNNPTNTFSNYAAGGNGAVEKFSSYRDKANVGADSFTSYAKSANAADIGFSNYGKSFNEGTDSFTSYAKSSDGETKVGFTSYGVNNTFKDYEKKGTTVSFARYTNISTTLSASASEAAISGSLVNKWVEPGKFFREKMMKEGIVMPMPDIKDKMPERSFLPRSILSKLPFSVSKIDELKQVFKASDNGSMEKMMRDSLEECERAPSRGETKRCVGSLEDMIDFVTSVLGRNVAVRSTHNVNGSKKSVMVGPVTGINGGKVTQSVSCHQSLYPYLLYYCHAVPKVRVYETDLLDPKTKTKINRGVAICHLDTSDWSPTHGAFLSLGSGPGRIEVCHWIFENDMAWTITD 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0310 628 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 7 627 - -
Aed6g0310 628 ProSiteProfiles BURP domain profile. 413 627 IPR004873 -
Aed6g0310 628 SMART BURP_2 411 627 IPR004873 -
Aed6g0310 628 Pfam BURP domain 413 625 IPR004873 -
Aed6g0310 628 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 7 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0310 Aed-Chr6 2712734 2715705 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0310 - - gmx:100776642 1155.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0310 6 2712734 2715705 Aed6g0310 6 2712734 2715705 ECH