Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0306 ATGTATAAACGTTCTAATGAAGAAAAAGATGCAAGTAATAAGAAGGTTAGAAATTGTGATACAGCAGCAGAAAGCAGTTTTCAAAGTTGTTGCTCACTGATTTGTAAACCAGCTGCTATGAAGACAGCCAACAGATGCTTATTGCTTCATAAAGTAACTCAGTCCTGGCCTTCCCCTGCCTTGTGTTTTGTGGAGACAGTGCCTCAAGATGCACAAAGTTCTCATGTTACAGCTTTTAATTCAGGTGATGGATCCTCAAACTCGGACAATGAGTCAACCTCGTCTAAGACTGTACGGGATGTTCATATTGAGAAGGGAACCCTCTATATGACTACCCTGATCATACCAAAGCAGGAATCAGCTTCCAATTCTTGTCAAGCTACAAATGAGGAGGAAGTTTTCAAAATTCTAAATGAAAGATCCCTTTATCCTGTGGGATGGATCCATACACATCCTTCTCAAAGTTGTTTCATGTCATCTGTGGATCTGCACACTCAATATTCCTACCAGATGATGATTCCTGAGGCATTTGCCATTGTCTTGGCACCAAATGATACCTCAAGGAGCTGCGGATTATTTCGCCTAACCGAACCTGAAGGAATGAATATTCTGAAAAATTGCCAGGAAACAGGATTTCATCCACACAAAGAACCAGATAATGGCAACCCCGTGTATGAGCACTGCTCCAATGTGTACAAAAACTCCAATCTAAGGTTTGAAATCTTTGATTTACGCTGA 738 0.4079 MYKRSNEEKDASNKKVRNCDTAAESSFQSCCSLICKPAAMKTANRCLLLHKVTQSWPSPALCFVETVPQDAQSSHVTAFNSGDGSSNSDNESTSSKTVRDVHIEKGTLYMTTLIIPKQESASNSCQATNEEEVFKILNERSLYPVGWIHTHPSQSCFMSSVDLHTQYSYQMMIPEAFAIVLAPNDTSRSCGLFRLTEPEGMNILKNCQETGFHPHKEPDNGNPVYEHCSNVYKNSNLRFEIFDLR 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0306 245 MobiDBLite consensus disorder prediction 75 98 - -
Aed6g0306 245 PANTHER AMSH-LIKE PROTEASE 104 245 - -
Aed6g0306 245 MobiDBLite consensus disorder prediction 75 94 - -
Aed6g0306 245 SUPERFAMILY JAB1/MPN domain 107 200 - -
Aed6g0306 245 ProSiteProfiles MPN domain profile. 64 201 IPR037518 -
Aed6g0306 245 Gene3D Cytidine Deaminase, domain 2 97 245 - -
Aed6g0306 245 PANTHER FI19924P1 104 245 - -
Aed6g0306 245 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 119 175 IPR000555 GO:0005515|GO:0008233|GO:0008237
Aed6g0306 245 CDD MPN_AMSH_like 102 245 IPR044098 GO:0016579|GO:0061578|GO:0070536|GO:0140492
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0306 Aed-Chr6 2677851 2682931 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0306 K11866 - gmx:100807282 414.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0306 6 2677851 2682931 Aed6g0306 6 2677851 2682931 ECH