Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0297 ATGTTAGGAGGCAACAATGGAAATCGCTTGCTTCCTGTTTTCTTGGACGAGACTCAATTTCGGCATCAAACTAATCCATCAAATCAATTGCAGTTGTTTGGAAATTTACAAGCTGGATGTAGTGTTGATCCAGTGAATTACTTTGGAAATGAGCATATCAGCTCCATGATTCAGCCTAATAAACGAAGCAAGGAAATGGAAGATATATCAAAACAAAGGCTTCAGATTTCCTTAAATTACAATGTCCACCAAGATGATGCTGATCGATTAGCAAGTATTCCAAACCCCAACCCTGTGTCAACAGGATTGAGGCTTTCATATGATGATGATGAGCGTCACTCATCTGTTACTTCTGCGAGTGGCAGCATGACTGCCACACCGTCTATCATGTTGTCTCTTGGTGACAACATAAGAACTGAGCTTGATAGGCAGCAAGAAGAGTTGGACCACTATGTTAAACTTCAGAAGGAACAACTGTCAAAGGGAGTGAGAGACATGAAGCAAAAGCACACGGCTTCTCTCCTTACCTCCATTGAGAAAGGTATTAGTACGAAGCTAAAGGAAAAAGATATGGAGATAGAAAACAAGAACCGGAAAAATAGGGAGCTGGCAGAAAGAATAAAGCAGGTGGCTGTTGAAGCACAAAGCTGGCATTACAGAGCAATGTATAATGAGTCAGTTGTCAATACATTAAGGAACAATCTTCAGCAAGTAATCTCACAAGGAGCTGAGCAAGGGAAGGAAGGGTTTGGAGATAGTGAAGTTGATGATGATGCCTCATATATAGATCCTAACAACTTCCTGAACATTCCAGCCACGCCTATAAACGCCGCTCACAAGAGCTACCAAGATATGGAGAATCTGACTTGCAGAGCATGCAAGGCAAAGACAGTTTCCATGTTGTTGATGCCTTGTAGGCACCTGTGCTTGTGTAAGGATTGTGAGGGATTTATCAATGTTTGTCCTGTGTGCCAGTTGATAAAAACTGCTAGTGTTGAGGTGTATCTGTCTTAA 1014 0.4172 MLGGNNGNRLLPVFLDETQFRHQTNPSNQLQLFGNLQAGCSVDPVNYFGNEHISSMIQPNKRSKEMEDISKQRLQISLNYNVHQDDADRLASIPNPNPVSTGLRLSYDDDERHSSVTSASGSMTATPSIMLSLGDNIRTELDRQQEELDHYVKLQKEQLSKGVRDMKQKHTASLLTSIEKGISTKLKEKDMEIENKNRKNRELAERIKQVAVEAQSWHYRAMYNESVVNTLRNNLQQVISQGAEQGKEGFGDSEVDDDASYIDPNNFLNIPATPINAAHKSYQDMENLTCRACKAKTVSMLLMPCRHLCLCKDCEGFINVCPVCQLIKTASVEVYLS 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0297 337 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 4 336 IPR017066 -
Aed6g0297 337 PIRSF SBP1_RNase_bind 1 337 IPR017066 -
Aed6g0297 337 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 272 337 IPR013083 -
Aed6g0297 337 Coils Coil 186 213 - -
Aed6g0297 337 MobiDBLite consensus disorder prediction 89 122 - -
Aed6g0297 337 PANTHER S-RIBONUCLEASE BINDING PROTEIN SBP1-RELATED 4 336 - -
Aed6g0297 337 Pfam Zinc finger, C3HC4 type (RING finger) 287 325 - -
Aed6g0297 337 ProSiteProfiles Zinc finger RING-type profile. 290 325 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0297 Aed-Chr6 2625494 2630263 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0297 284 325 Miscellaneous Gene Families AT4G39050 38.095 4.85e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0297 K19042 - gmx:100791550 643.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0297 6 2625494 2630263 Aed6g0297 6 2625494 2630263 ECH