Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0290 ATGGCAACAGAAGAAGCAACCATCCACGGCGATATCTTAGAGGCCATATTCTCACACGTGCCACTCATCCACCTCGTGCCCGTCTCTCACGTGTCGAATTCATGGAAGCGTGCAGTGTCCTCCTCCCTCGCACACGTCAGACCCATCAAGCCGTGGCTCGTAGTCCTCACTCAGAGCCCCCACTCCTCGCACGTGTCATCCCTCCACGCCTACGACCCTCGCTCGCACGTGTGGCTCGAAATAAAAAACACCACGTGCTTTCACACTTCCCCCGTGCGATCCTCCCACTCGGCGCTGTTCTACACGCTCACCCCGGCGGAGTTCGCTTTCTCCGTCGACGCGCTGCACCTGACCTGGCACCACGCGCCCTCCCCACGCGTGTGGCGCACCGACCCCGTCGTGGTGCGCGTGGGGCCGCGCGTGGTAATGTTGGCCGGCGTGTGCGAGTTCGAGGACGACCCGCTCGCGGTGGAGATGTACGACATGAAGAGCCGCGCCTGGGAGATGTGCCCCTCCGTGCCGGAGATTCTGAAGGGCTCAACGGCGTCGTCGTGGCTGTCGGTGGCGGTGGCCGGAGAAGTTATGCACGTGACGGAGAAACACTCCGGCGTGACGTACTCGTTCGACACTGTTTCGAAAACGTGGATTGGACCGTTTAATTTGAGACCTCACGAGAGTGTTTTTCACTGCGTCACCGGAACCCTAGGGGGGAGGATGATGGTGGCGGGGGTGGTGGGGGAAGTGGGGAACGTGAAAAGCGTGAAGCTGTGGGAGGTTCGGGTTCGGGGGGAATTAGGTTCGGGAATGGAAGAAGTGGGTGAGATGCCGAAGGAGATGGTTCGGAAGTTATTCAGTGGCTCGGAGTTAGTTTCGGTGGAGGTGACGTGGATTGGGGATTTTGTTTACGTGAGGAACACTTTCGAACCGGAGGAGCTGGTGTTGTGTGAGTTTGTGAATGAGGTTGGGTGCGTGTGGCGGAGTGTACGGAACGCCGCCGTGAGATACGGCGAGAGGATGGTGGTTTGCGGAGGCGATGTGTGCATGGAGGATCTGCAGCAGGCGGTGATGTCGGAAAATCCGACAGTTTCCATGAAACAAGTGTGA 1104 0.5915 MATEEATIHGDILEAIFSHVPLIHLVPVSHVSNSWKRAVSSSLAHVRPIKPWLVVLTQSPHSSHVSSLHAYDPRSHVWLEIKNTTCFHTSPVRSSHSALFYTLTPAEFAFSVDALHLTWHHAPSPRVWRTDPVVVRVGPRVVMLAGVCEFEDDPLAVEMYDMKSRAWEMCPSVPEILKGSTASSWLSVAVAGEVMHVTEKHSGVTYSFDTVSKTWIGPFNLRPHESVFHCVTGTLGGRMMVAGVVGEVGNVKSVKLWEVRVRGELGSGMEEVGEMPKEMVRKLFSGSELVSVEVTWIGDFVYVRNTFEPEELVLCEFVNEVGCVWRSVRNAAVRYGERMVVCGGDVCMEDLQQAVMSENPTVSMKQV 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0290 367 Pfam F-box domain 11 43 IPR001810 GO:0005515
Aed6g0290 367 Gene3D - 32 264 IPR015915 GO:0005515
Aed6g0290 367 PANTHER KELCH REPEAT-CONTAINING F-BOX-LIKE PROTEIN 3 355 - -
Aed6g0290 367 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 3 355 - -
Aed6g0290 367 SUPERFAMILY Kelch motif 51 258 IPR015915 GO:0005515
Aed6g0290 367 SUPERFAMILY F-box domain 11 43 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0290 Aed-Chr6 2575054 2576157 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0290 - - gmx:100819427 632.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0290 6 2575054 2576157 Aed6g0290 6 2575054 2576157 ECH