Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0284 ATGTCTCTGGCATCGTTTTTTCTTATCTTCCTTTGTTATTATCATGCTCTTGCTGATCCAAGAGCCACAGAGGTAGCAGTGTTGTGCAGCAACACAACAGCACCAATGCCTCAGAGACAAGCTTTCTTAACAAACTTCTATCATGCCTTGGAAGCCTTAACCGCTTTGGTTACAAGGCAAAAATATGCTGTTGTTGTTAAAGGGACTACTACTACTACTACTCAAAATACTGCCACTGTCTATGCTTTTGGTGAGTGCATGAGAGATCTTACAAAACCAGATTGTGATGTGTGCTTTGCACAGTGCAAGACACGTGTCCTCAGGTGCTCCCCATTTCAGAGAGGAATTAATGGTGGCATGTTTTTCTTTGATGGGTGCTATCTTAGGTATGATGGCTACAACTTCTTCAATGAGAGTGTTAGTCCTCAGGACTTGACTGTTTGTGGAACTGAAGATTTTAGTGGGAATTGGAGTGTGTATAAGGCCAATACTTTAGATTTGGTGAGGAATTTGAGCATTGAAGCACCAAAGAATGAAGGGTTCTTTGTGGGGTATGTGAGAAAAAGGAATGTGACTGTCTATGGGTTGGCTCAGTGCTGGAAGTTTGTGAATGGCAGTGCCTGTCAGAACTGCTTGGCTGAAGCTGTTACTAGGATTGATTCTTGTGCTCCAAAAGAAGAAGGGAAGGCATTGAATGCTGGGTGTTACTTGAGGACACAAAAATCTTGCTATAATTGTGGCTGCAGCATCTGCATCCCTGGCTCTTCTCCTGATTGTTGCAACTGTGATTTTCTTTGTGAGGACAAATTTACTGAAGCGGAGGAGAGAAAGAAGACAATTTGGTGTACTTTTGGACACAGTGAACAAGTCCAAGCTAAATGTGCCATATGA 891 0.4254 MSLASFFLIFLCYYHALADPRATEVAVLCSNTTAPMPQRQAFLTNFYHALEALTALVTRQKYAVVVKGTTTTTTQNTATVYAFGECMRDLTKPDCDVCFAQCKTRVLRCSPFQRGINGGMFFFDGCYLRYDGYNFFNESVSPQDLTVCGTEDFSGNWSVYKANTLDLVRNLSIEAPKNEGFFVGYVRKRNVTVYGLAQCWKFVNGSACQNCLAEAVTRIDSCAPKEEGKALNAGCYLRTQKSCYNCGCSICIPGSSPDCCNCDFLCEDKFTEAEERKKTIWCTFGHSEQVQAKCAI 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0284 296 ProSiteProfiles Gnk2-homologous domain profile. 23 135 IPR002902 -
Aed6g0284 296 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 14 240 - -
Aed6g0284 296 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 14 240 - -
Aed6g0284 296 Pfam Salt stress response/antifungal 152 240 IPR002902 -
Aed6g0284 296 Pfam Salt stress response/antifungal 29 131 IPR002902 -
Aed6g0284 296 Gene3D - 22 135 IPR038408 -
Aed6g0284 296 Gene3D - 144 243 IPR038408 -
Aed6g0284 296 ProSiteProfiles Gnk2-homologous domain profile. 141 244 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0284 Aed-Chr6 2501763 2511162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0284 16 249 Receptor kinase-like Gene Family AT1G70530 49.789 5.91e-77 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0284 - - gmx:100802190 440.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0284 6 2501763 2511162 Aed6g0284 6 2501763 2511162 ECH