Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0186 ATGTGTCTGTCACTCCCTTCACCAGCTATGGCCGCAGAGGAGCCAGCGGATGCTCCTCCCCCGCTGAATCTGTTTTCCGAAACCCTAGGTTCCTCCGAATTGGTGGCTGAATTTGGGGGTGATTCCTTTCAGTCCCAGCCCGGCGGCGGTTCTATTTTTCCGGCGGATTCCGGTATTTACGCCGGCGAGTTTGGCCAGGACGAGTCCGGCATGTATTCCTCGCTCGGGCAGCTCAACGACGAGTCTTCTCCGCCGTGGTCGTCGGCGCTGGGTTCGAATTCCCGCGTCTCCGCGGTGGCGCCGGAATCGTGGATCGTTTCCCCGGAAAACTGGCTCTTATCCGAAAATGAAGGTTCAGCGGATACTGAATCTGCCTCCGAAGTTGTGCCTTCTAAGATGGGAGCAGGGCTTCGGAATCTTGGCAATACTTGCTTTCTCAATGCTATTCTGCAATGCTTTACGCATACCGTGCCTCTAGTGCAGGGTCTTCGTTCAAGCACTCATACCGTCCCTTGTTCTGGTCATATGGATCATGGGTTCTGTGTTATTTGTGCCTTTCGTATCCTGGTTGAAAAATCCTTTGCAGCTTCAGGACGGGCTATTTCACCCATCAAATTTGTGAACAATTTGGACCATTTTTCTTCTGAATTTAGAAGATACCAGCAGGAGGATGCCCATGAATTTATGCAGTGTGCCTTAGATAAACTGGAAAGATGTTTCCTGGATTTGAAGAAAAGTAATTTAAATTTTGAAGATGATAATCTTGTGGAGAAAGTATTTGGCGGTTGCTTCATTAGCAAACTTCAATGTTGCAGTTGTGACCGCACTTCTGACACTTTTGAGCCACTAATTGATATGAGTTTAGAGATAGAAAATGTAGATTCTCTTCCAAGTGCTCTGGATTCTTTTACTAAGGTGGAAAACATTGATGAAAACCTTAGATGTGATAACTGCAAGGAAGAAGTGTCCATGGAGAAGCAGCTTATGTTGGATCAGACACCATCAGTTGCAGCATTTCATTTAAAGAGATTTAAGACACATGGGACTCTTGTTGAAAAGATTGATAAGCATATTGATTTCCCATTGGAGTTAGACTTGCAGCCTTACACCGTTAATCAAAACTCTAATGCATCATTGAAATATGATTTATATGCCATTGTTGTGCATACTGGATTTTCGTCTACTTCAGGGCATTACTTCTGCTTTATTCGTTCTGCTCCAGACACATGGCATAAATTGGATGATTCCATGGTTACTAAGGTCTCTGTAGACTCTGTACTATCTCAGGAAGCATACATATTGTTTTATGCACGGCAGGGTACTCCATGGTTTTCGAGTATTATGGAATCTCAAACACAATATTTGGATCCAAATATTTTGAGTACATCGCCGAAGTCGGTTTTAGATGTTGATGAGAGCATGTTGAAAACAATTCCAATTTTACTTCCAAATATTGAAAGAGGGGTGGCTGATCAATCCAATGAATGTTCTGAGCAGATGTTTGATTATTATTGTCAAGAAGAAAATGAATTTCTTGAAATAAATGACACTAAAGATGCTACTCATGGCTGTGGACAATTGCCCTCTGGGTCAAATCAGGAAAGTTTTGATTTAGATAGCTCTAAAGATGTTGATGCCCAAAAGCTATTTAGGAACAAGGCCACCTTGGATGATAGTGCCATGTTTGATGGAAATTCATATATTGGGGATAACAATAACCGTCAGGAAGTTGTTGGTTTTAGAGGGAATGCTGGTTTCCATTCTTTAACTCCACCTAACTCGTCTTCTCCTGATGATGCTTCAGATAAGTCCCATATTTCACGTGATAATTTGAAGAGGGAGAATCAACGGAGCCGTAAAAGATCATCAAATAAGTTAACCGGGGATTCTGCAAAAAGACAAGCCATAAGATATCTTACCAACCATAGATTAAGGAGAGGGGGTCTTATGAAATATCTTGATACGGATCAATCTCTGGACAAGAAGAGAAAAAAGGTGGATTCTCTGCAGTGTAAGAAAGGCACAAAAAAATAA 2034 0.4238 MCLSLPSPAMAAEEPADAPPPLNLFSETLGSSELVAEFGGDSFQSQPGGGSIFPADSGIYAGEFGQDESGMYSSLGQLNDESSPPWSSALGSNSRVSAVAPESWIVSPENWLLSENEGSADTESASEVVPSKMGAGLRNLGNTCFLNAILQCFTHTVPLVQGLRSSTHTVPCSGHMDHGFCVICAFRILVEKSFAASGRAISPIKFVNNLDHFSSEFRRYQQEDAHEFMQCALDKLERCFLDLKKSNLNFEDDNLVEKVFGGCFISKLQCCSCDRTSDTFEPLIDMSLEIENVDSLPSALDSFTKVENIDENLRCDNCKEEVSMEKQLMLDQTPSVAAFHLKRFKTHGTLVEKIDKHIDFPLELDLQPYTVNQNSNASLKYDLYAIVVHTGFSSTSGHYFCFIRSAPDTWHKLDDSMVTKVSVDSVLSQEAYILFYARQGTPWFSSIMESQTQYLDPNILSTSPKSVLDVDESMLKTIPILLPNIERGVADQSNECSEQMFDYYCQEENEFLEINDTKDATHGCGQLPSGSNQESFDLDSSKDVDAQKLFRNKATLDDSAMFDGNSYIGDNNNRQEVVGFRGNAGFHSLTPPNSSSPDDASDKSHISRDNLKRENQRSRKRSSNKLTGDSAKRQAIRYLTNHRLRRGGLMKYLDTDQSLDKKRKKVDSLQCKKGTKK 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0186 677 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 84 465 - -
Aed6g0186 677 MobiDBLite consensus disorder prediction 654 677 - -
Aed6g0186 677 Gene3D Cysteine proteinases 131 443 - -
Aed6g0186 677 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 84 465 - -
Aed6g0186 677 MobiDBLite consensus disorder prediction 71 92 - -
Aed6g0186 677 SUPERFAMILY Cysteine proteinases 134 438 IPR038765 -
Aed6g0186 677 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 136 151 IPR018200 GO:0004843|GO:0006511
Aed6g0186 677 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 135 439 IPR028889 -
Aed6g0186 677 MobiDBLite consensus disorder prediction 601 627 - -
Aed6g0186 677 MobiDBLite consensus disorder prediction 1 22 - -
Aed6g0186 677 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 381 399 IPR018200 GO:0004843|GO:0006511
Aed6g0186 677 MobiDBLite consensus disorder prediction 583 634 - -
Aed6g0186 677 Pfam Ubiquitin carboxyl-terminal hydrolase 136 436 IPR001394 GO:0004843|GO:0016579
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0186 Aed-Chr6 1605961 1610258 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0186 130 453 Miscellaneous Gene Families AT4G31670 34.535 1.91e-54 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0186 K11855 - gmx:100808015 970.304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0186 6 1605961 1610258 Aed6g0186 6 1605961 1610258 ECH