Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0179 ATGGGAATGAGCAACAATGTGATCGGAGGCATAAACTTCGTGGCGGTGATCCTCTCAATCCCAATAATCGGCGCCGGAATCTGGCTAATGAACGAGCAAGCTGATTCCTGCGTCCAGTTTCTGCAATGGCCAGTCATAATCCTCGGAGTCCTCATCCTGGTCGTGGCTCTCGCAGGTTTCATCGGTGCCTTCTTCAGAGTGTCGTGGCTCCTCATAGTGTACCTCGTCGCCATGCTCGTCCTCGTGATCCTTCTCGTGTCTTTGGTGGTTTTCGTCTACATGGTAACGATTCGAGGCCACGGCAACATCGAACCCAACCGCGCTTACTTGGAGTACCGAATGGACGACTTCTCCGGCTACCTCCGTCGTAGGGTTAGAAGCTCCTTCAAGTGGGACCGCATCAGAAGCTGCCTTAGCCAGACCAACATGTGCGCCGAGCTTAACCAGAGTTTTAGAATGGCTCAGGACTTCTTCAACGCGCGTCTCACCCCCATGCAGTCAGGGTGCTGCAAGCCACCTACGAAATGTGCTTACACGTTTGTGAATCCAACCTACTGGATTAGCCCCATCAACACAGAAGCAGATATGGATTGCCTGCAATGGAGCAACGAGCAGACACAACTTTGCTACAACTGTGACTCTTGCAAGGCCGGTTTATTGGCAAATCTTAGAAAGGAGTGGAAAAGAGCCAATGTGATATTAATCATCACTGTCATTGTTTTAATAATCGTTTATTTGACAGGCTGCTTTGCCTTTAGGAATGCCAAAACTGAGGACCTCTTCCGCAAATACAAACAAGGCTATACTTGA 810 0.4963 MGMSNNVIGGINFVAVILSIPIIGAGIWLMNEQADSCVQFLQWPVIILGVLILVVALAGFIGAFFRVSWLLIVYLVAMLVLVILLVSLVVFVYMVTIRGHGNIEPNRAYLEYRMDDFSGYLRRRVRSSFKWDRIRSCLSQTNMCAELNQSFRMAQDFFNARLTPMQSGCCKPPTKCAYTFVNPTYWISPINTEADMDCLQWSNEQTQLCYNCDSCKAGLLANLRKEWKRANVILIITVIVLIIVYLTGCFAFRNAKTEDLFRKYKQGYT 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0179 269 PRINTS Transmembrane four family signature 38 64 - -
Aed6g0179 269 PRINTS Transmembrane four family signature 6 29 - -
Aed6g0179 269 PRINTS Transmembrane four family signature 65 93 - -
Aed6g0179 269 PANTHER TETRASPANIN-8-RELATED 1 268 IPR044991 GO:0009734|GO:0016021
Aed6g0179 269 Pfam Tetraspanin family 7 250 IPR018499 GO:0016021
Aed6g0179 269 PANTHER TETRASPANIN/PERIPHERIN-RELATED 1 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0179 Aed-Chr6 1557305 1559343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0179 1 269 Miscellaneous Gene Families AT5G46700 69.145 1.25e-132 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0179 - - gmx:100791755 479.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0179 6 1557305 1559343 Aed6g0179 6 1557305 1559343 ECH
Aed6g0179 6 1557305 1559343 Aed7g1467 7 15641536 15643258 PCT