Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0172 ATGGTCAGTATGGTCAACCATTTCAGCGCATCAAACGGCCATGGTTGGACAAAAACTTACACTTTTTTAGAAGTGAGGGGTGATCGATCTTTCCACACTCAAACCTTCTCAGAGTCTCATTCTCATCAAATCAAAACTATGAGAGCTTCTCGCATCCGAACCGGCTCCTTGCCGGTCCAGAACCCGGTTCTCCCCGGCTCACCGCAAGTCTCGCTCCCGCGCCGAGCCTCCTTCACCGGCGACAAGAACCACGCTCAGTTACCCAGGCTTTCAATGCATTCTTCCCGCTCCAAACCCCGCAGATCCTCGTCAGAGCGCGACTTCCAGAATTTCGCCGTTCGCGGGGATCTGAACCGAACCAGATCGTGCTCGTTCCCGCCGATCATACCTCACGATGAAGATTTCCTATCCGACACCGCCACGCGCAAACTCGGGATCCGGCCGGAGGATCTACAATTCGGGGGCGGAGACGGCGGAAATCACGGGGGCTCGAACCTCACCGGCGGCAACGGCGGCGAGAGGATGAAAATCGGCGCGTACTACGAGGAAATGTTGAGGTCGAACCCGACGGACGCGCTTCTGCTTAGAAACTACGCCAAATTTCTCCACGAGGTGGAGAAAGACACGGCGAGAGCAGAGGAATATTATGGAAGAGCGATTCTCGTGAACCCTGGCGATGGCGAATTGCTTTCGCTCTACGGAACGCTTATTTGGGAAACGCAGAGAGACGAAGACAGAGCCAAATCTTACTTTGACCAAGCCATTCACGCCGCTCCTGATGATTGTACGGTGCTGGGATCCTACGCACACTTCATGTGGGAAGCGGAGGAGGAGGAGGAAGAGGAAGAAGAAGTTAACGGAGGGATGACGGAGAAAACGGTGACGGAGATCATCGCTGCTTTTTAG 906 0.5453 MVSMVNHFSASNGHGWTKTYTFLEVRGDRSFHTQTFSESHSHQIKTMRASRIRTGSLPVQNPVLPGSPQVSLPRRASFTGDKNHAQLPRLSMHSSRSKPRRSSSERDFQNFAVRGDLNRTRSCSFPPIIPHDEDFLSDTATRKLGIRPEDLQFGGGDGGNHGGSNLTGGNGGERMKIGAYYEEMLRSNPTDALLLRNYAKFLHEVEKDTARAEEYYGRAILVNPGDGELLSLYGTLIWETQRDEDRAKSYFDQAIHAAPDDCTVLGSYAHFMWEAEEEEEEEEEVNGGMTEKTVTEIIAAF 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0172 301 Gene3D Tetratricopeptide repeat domain 167 286 IPR011990 GO:0005515
Aed6g0172 301 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 47 284 - -
Aed6g0172 301 MobiDBLite consensus disorder prediction 53 76 - -
Aed6g0172 301 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 47 284 - -
Aed6g0172 301 SUPERFAMILY TPR-like 179 280 IPR011990 GO:0005515
Aed6g0172 301 MobiDBLite consensus disorder prediction 53 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0172 Aed-Chr6 1517003 1518778 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0172 - - gmx:100788211 398.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0172 6 1517003 1518778 Aed6g0172 6 1517003 1518778 ECH