Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0145 ATGGAGATTTCTCTGGAGAGGTCTAACTCTCGGAGAGTGGAGGACCAATACGCTTCGAGTTCTTTGTTCACCGGTGGTTTCAACCAGCTCACACGTGCCCATTTGAAGGACAAGGTGATTGAGTCCGAGTCCAGCCACCCCCAGATGGCTGGTGCAAAAGGGTCCTCTTGTGCAGTGCCAGGGTGTGATGGAAGGGTCATGACCGATGAAAGAGGGTTGGATGTGGTTCCATGTGAGTGTGATTACAAGATTTGTAGGGATTGTTATAGGGATGCTTTGAGGGTTGGTGAGGGGATTTGCCCTGGCTGTAAAGAGACTTACAACGAGCCTGAAATGCGGTTAGGTGTGGCTAGCTCACAGACACTGCCACTGCCTCCTGCTGGTGGAGTTAACAAGATGGAGAGGAGGTTGTCGTTGATGAAAACGGGGGCGTTCATGAGAAGCCAGAGTAATAATGACTTTGATCATGCTAAGTGGTTGTTTGAGACTAAGGGGAGCTATGGATATGGGAATGCTATGTGGCCTGCAGAATCAGAACCTGATGTCACTTCTGCTTCTGATTGGATGGGGGGTGACCCTAATGTGTTCAAGGAAAAGCAGTGGAGGCCCTTGACCCGCAAATTGAATATTTCTGCTGCAATTCTCAGTCCTTATCGGCTCATGATATTAATTCGGCTAGTGGTTCTAATTTTCTTCCTAAAGTGGAGGGTCGAAAACCCCAATGAAGATGCAGTGTGGCTGTGGGGCATGTCTGTGGTTTGTGAAATCTGGTTTGCCTTCTCCTGGTTGCTCGACCAGCTTCCAAAGCTCTTCCCAGTAAACCGTGTCTCTGATCTTGATGTTCTGAAAGAGAAGTTTGAAACTCCAAACCCCAACAATCCTACTGGAAAATCTGATCTTCCAGGAATAGACATGTTTGTCTCAACTGCTGATCCAGAAAAAGAACCACCACTCGTTACTGCAAACACCATTCTTTCTATTCTAGCCGCTGATTATCCCGTTGAGAAGCTCTCATGCTATGTCTCTGACGATGGAGGTGCACTTCTGACTTTTGAGGCCATGGCTGAGGCTGCAAGTTTTGCCAACATGTGGGTCCCTTTTTGCCGGAAGCATAACATTGAACCCAGGAACCCGGAGTCTTACTTTAACCTGAAGAGGGATCCCTACAAGAACAAAGTGCGCTCTGACTTTGTGAGGGACCGCAGGCGTTTGAAGCGTGAGTATGACGAGTTTAAGGTTCGGATTAACAGCCTTCCTGAGTCGATCCGGCGCCGTTCCGATGCTTTTAATGCCAAAGGAGAAATGATAGCTATGAAGAGGTGGAGAGAAAATGGAAATGAAGATCCAATTGAGAATTTGAAAATTCCTAAAGCTACATGGATGACTGATGAGACTCACTGGCACGGTACTTGGACAATTGCTGCACCAGAGCATTCCAGAGGTGATCATGCCAGTATCATACAGGTGATGTTAAAACCCCCAAGTGATGAACCACTATTTGGCACAGCATCAGATTCAAATGCATTGGATTTCAGTGAAGTTGATATTCGTCTTCCCATGCTAGTCTATGTTTCTCGTGAAAAACGACCCGGCTATGATCACAACAAAAAGGCTGGGGCTATGAATGCCCTTGTTCGAGCCTCAGCCATAATGTCCAATGGCCCTTTCATACTTAATCTCGACTGTGATCACTACATATATAATTCTCAAGCACTGAGAGAAGGAATGTGCTTCATGATGGACCGCGGTGGGGACAGGCTCTGCTATGTTCAATTCCCTCAAAGGTTCGAAGGTATCGACCCCAATGATCGCTATGCAAATCATAACACTGTCTTCTTTGATGTCAATATGCGAGCTCTAGATGGAATCCAAGGTCCTGTGTACGTTGGCACAGGATGTCTATTTCGAAGAACTGCTCTCTATGGCTTTGATCCACCTCGGATTAAAGAGGTCACCGGTTGGTTTGGTCGGAAGAACAAGAAATCCTCAACAGTAGCCTCTGTATCTGAGGAACAGTCATTGAGGAATAACAACAACATAGAGGATGAAGAAATGGCCAATGTTCTTGTTCCAAAGAAATTCGGCAACTCGAGCCTTCTTGTTGATTCAATCAGGGTGGCAGAGTTCCAAGGCCTTCCCCTTGCTGATCATTCGTCTATCAAATATGGCCGGCCACCCGGTGCTCTAACGCTCCCTCGTGATCCTCTCGATGCTCCTACCGTTGCTGAGGCCATCAATGTCATCTCATGTTGGTATGAAGACAAAACTGAATGGGGCCTCAGAGTTGGGTGGATTTATGGCTCTGTTACTGAAGATGTTGTGACAGGCTACAGAATGCATAACAGAGGATGGAAGTCTATATACTGTGTCACCAAAAGGGATGCATTTCGCGGCACTGCTCCAATCAATCTCACAGATAGGCTTCACCAGGTTCTCCGTTGGGCTACCGGCTCCGTCGAGATCTTCTTTTCGCGCAACAATGCTCTCTTGGCCAGCTCTAGATTGAAATTTCTTCAGAGGATTGCTTACCTCAATGTTGGAATTTATCCATTCACTTCCATCTTCCTCATTGTGTATTGCTTTGTTCCCGCTCTCTCACTTTTCACTGGCCAGTTCATTGTTCAAACACTAGAAGTCACATTCCTGGTTTACCTCTTGGGCATAACCTTGACCCTTGTCATCCTCGCTGCCTTGGAAATCAAGTGGTCTGGCATTGAGCTTGAAGAATGGTGGAGGAATGAACAATTCTGGTTGATTGGAGGCACAAGTGCACATCTTGCTGCTGTGCTTCAGGGTCTGCTTAAGGTGATGGCTGGCATTGAAATCTCATTCACTTTGACATCAAAGTCCGGCGGTGAGGATGAGAACGACGAATATGCTGACCTCTATACCATTAAGTGGTCATCTCTTATGATACCACCGATCACAATCATGATGGTTAATCTGATAGCCATTGCTGTGGCTGTGAGCAGAACTATATACAGTGAAGACCGTGAATGGAGCAGTTTGCTTGGAGGTGTGTTTTTCAGCTTTTGGGTGTTGTCTCATTTGTATCCCTTTGCAAAGGGGCTAATGGGTAGAAGGGGTAGGACACCCACTATTGTGTTTGTATGGTCTGGTCTAATTTCAATCACTATCTCACTCCTTTGGGTTGCTATTGACCCTCCCTCTGGCAGCAGTGGCCAAATTGGAGGGTCATTCCAATTCCCTTAA 3213 0.4662 MEISLERSNSRRVEDQYASSSLFTGGFNQLTRAHLKDKVIESESSHPQMAGAKGSSCAVPGCDGRVMTDERGLDVVPCECDYKICRDCYRDALRVGEGICPGCKETYNEPEMRLGVASSQTLPLPPAGGVNKMERRLSLMKTGAFMRSQSNNDFDHAKWLFETKGSYGYGNAMWPAESEPDVTSASDWMGGDPNVFKEKQWRPLTRKLNISAAILSPYRLMILIRLVVLIFFLKWRVENPNEDAVWLWGMSVVCEIWFAFSWLLDQLPKLFPVNRVSDLDVLKEKFETPNPNNPTGKSDLPGIDMFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGALLTFEAMAEAASFANMWVPFCRKHNIEPRNPESYFNLKRDPYKNKVRSDFVRDRRRLKREYDEFKVRINSLPESIRRRSDAFNAKGEMIAMKRWRENGNEDPIENLKIPKATWMTDETHWHGTWTIAAPEHSRGDHASIIQVMLKPPSDEPLFGTASDSNALDFSEVDIRLPMLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSQALREGMCFMMDRGGDRLCYVQFPQRFEGIDPNDRYANHNTVFFDVNMRALDGIQGPVYVGTGCLFRRTALYGFDPPRIKEVTGWFGRKNKKSSTVASVSEEQSLRNNNNIEDEEMANVLVPKKFGNSSLLVDSIRVAEFQGLPLADHSSIKYGRPPGALTLPRDPLDAPTVAEAINVISCWYEDKTEWGLRVGWIYGSVTEDVVTGYRMHNRGWKSIYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLASSRLKFLQRIAYLNVGIYPFTSIFLIVYCFVPALSLFTGQFIVQTLEVTFLVYLLGITLTLVILAALEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVMAGIEISFTLTSKSGGEDENDEYADLYTIKWSSLMIPPITIMMVNLIAIAVAVSRTIYSEDREWSSLLGGVFFSFWVLSHLYPFAKGLMGRRGRTPTIVFVWSGLISITISLLWVAIDPPSGSSGQIGGSFQFP 1070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0145 1070 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN 14 1068 - -
Aed6g0145 1070 Pfam Cellulose synthase 303 1057 IPR005150 GO:0016020|GO:0016760|GO:0030244
Aed6g0145 1070 SUPERFAMILY RING/U-box 46 115 - -
Aed6g0145 1070 SUPERFAMILY Nucleotide-diphospho-sugar transferases 318 862 IPR029044 -
Aed6g0145 1070 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 14 1068 - -
Aed6g0145 1070 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 505 658 IPR029044 -
Aed6g0145 1070 Pfam RING/Ubox like zinc-binding domain 59 108 - -
Aed6g0145 1070 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 40 121 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0145 Aed-Chr6 1290874 1295766 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0145 5 1070 Glycosyltransferase AT3G03050 76.115 0.0 1696
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0145 K20924 - gmx:100813900 1976.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0145 6 1290874 1295766 Aed6g0145 6 1290874 1295766 ECH