Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0115 ATGAATCGCCACCACGATCCCAATCCGTTCGAGGAAGAAGAAGTCAATCCATTTTCGAATGGCACTGCTGCTCCTGCATCAAAATCACGTACACCCTTAGCATCTGAGCCACTGGGTTTTGGTCAAAGACATGACGCTACAGTTGATATTCCTTTGGATACTAATACTACAAATGACTCCAAGAAAAAAGGGCAAGAGCTAGCAGCTTGGGAAACAGAATTAAAACGGAGAGAAAAGGAAATAAAAAGAAGAGAAGAGGCTGTTTCTAGAGCTGGTGTTCCTGTTGATGATAAGAATTGGCCTCCAATTTTCCCAATCATTCACCATGATATTGCCAATGAGATACCGGTTCATGCTCAGAGGCTGCAATATTTGGCCTTTGCAAGTTGGTTAGGAATTGTTCTCTGCCTAGTTTTTAATGTAGTTGCTGTGACTGTCTGTTGGATCAGAGGCGGCGGTGTTAAAATTTTTTTCCTTGCGGTTATATATGCTCTACTGGGTGTTCCCCTTTCATATGTTCTTTGGTACAGGCCCCTCTATCGTGCTATGAGGACGGACAGTGCACTGAAGTTTAGTTGGTTTTTCCTGTTCTACTTGCTTCATATTGGATTTTGCATCTTTGCTGCAATTGCGCCTCCAATTGTTTTTCATGGAAAATCATTAACGGGCATCCTTGCTGCCATTGATGTCTTCTCAGACCATGTATTGGTTGGGATATTCTATTTGATTGGATTTGGCATGTTTTGCTTGGAGGCTCTTCTAAGCTTATGGGTACTTCAGAAAATATACATGTATTTCCGGGGGCACAAGTGA 813 0.4231 MNRHHDPNPFEEEEVNPFSNGTAAPASKSRTPLASEPLGFGQRHDATVDIPLDTNTTNDSKKKGQELAAWETELKRREKEIKRREEAVSRAGVPVDDKNWPPIFPIIHHDIANEIPVHAQRLQYLAFASWLGIVLCLVFNVVAVTVCWIRGGGVKIFFLAVIYALLGVPLSYVLWYRPLYRAMRTDSALKFSWFFLFYLLHIGFCIFAAIAPPIVFHGKSLTGILAAIDVFSDHVLVGIFYLIGFGMFCLEALLSLWVLQKIYMYFRGHK 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0115 270 Coils Coil 67 87 - -
Aed6g0115 270 Pfam SCAMP family 98 268 IPR007273 GO:0015031|GO:0016021
Aed6g0115 270 MobiDBLite consensus disorder prediction 1 65 - -
Aed6g0115 270 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 1 270 IPR007273 GO:0015031|GO:0016021
Aed6g0115 270 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN 4 1 270 - -
Aed6g0115 270 MobiDBLite consensus disorder prediction 49 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0115 Aed-Chr6 1054015 1059864 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0115 1 270 Miscellaneous Gene Families AT1G32050 74.632 2.19e-152 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0115 K19995 - gmx:100806586 513.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0115 6 1054015 1059864 Aed6g0115 6 1054015 1059864 ECH