Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0082 ATGGGTAATCCACGGAAACTGAGTTCCACCGACGAGATTCATTCGGCGGCAAGGTCCGGCGATCTCATCGCCGTTAACTCGATTTTGGCTTCAAATCCTTTGGCCGTTAATTCCAGAGATAAGCATTCCAGAACACCCCTACATTTGGCAGCATTTTCTGGTCAAGCAGAAGTAGTCACTTATCTCTGCAAGCACAAGGCTGATGTTGGTGCTTCTGCTATGGATGACATGGCTGCAATACACTTTGCTTCACAGAAGGGACATTTAGAGGTTGTTCGGGCTCTACATTCAGCCGGGGCCTCTCTCAAATCCTTTACCCGCAAAGGCATGACTTCATTACACTATGCTGTTCAAGGTTCCCATTTGGAACTCGTCAAGTACTTGGCCAAGAAAGGGGCAAGCCTTGGTGTCAAGACAAAGGCTGGAAAGACTCCTTTGGATCTTGCTACCAATGAAGAAATCCGCTCCTTTCTGGAGGAATTTGAGAAGTCAGCAAAGAATAGAGAATTGGGAAAGAAAGATGAAGATAAAGATACAGCTGAAGAATCTGATCCAAAGACATCTGCATTGGGTTCTGAAGGTGATTTGAGTTCTGAACCTCCTGCAGCAGCCGTTGATGAAGAAGACAATGAGAGAGAGAAGAGGAAGAAGGGTAACAAAGATGACGCAAGAGAAGAGTCGTCACAACCAAAAAAGGCAAGAGTTAAGTTAGGCCATCTCCAAAGTTCAGACGATACCGAAGAAGAAGAAAACCTGTAA 759 0.4545 MGNPRKLSSTDEIHSAARSGDLIAVNSILASNPLAVNSRDKHSRTPLHLAAFSGQAEVVTYLCKHKADVGASAMDDMAAIHFASQKGHLEVVRALHSAGASLKSFTRKGMTSLHYAVQGSHLELVKYLAKKGASLGVKTKAGKTPLDLATNEEIRSFLEEFEKSAKNRELGKKDEDKDTAEESDPKTSALGSEGDLSSEPPAAAVDEEDNEREKRKKGNKDDAREESSQPKKARVKLGHLQSSDDTEEEENL 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0082 252 MobiDBLite consensus disorder prediction 166 252 - -
Aed6g0082 252 Pfam Ankyrin repeats (3 copies) 13 71 IPR002110 GO:0005515
Aed6g0082 252 Pfam Ankyrin repeats (3 copies) 80 158 IPR002110 GO:0005515
Aed6g0082 252 ProSiteProfiles Ankyrin repeat profile. 75 107 IPR002110 GO:0005515
Aed6g0082 252 Gene3D - 7 183 IPR036770 -
Aed6g0082 252 MobiDBLite consensus disorder prediction 166 184 - -
Aed6g0082 252 ProSiteProfiles Ankyrin repeat region circular profile. 108 140 - -
Aed6g0082 252 ProSiteProfiles Ankyrin repeat profile. 42 74 IPR002110 GO:0005515
Aed6g0082 252 PANTHER ANKYRIN REPEAT PROTEIN 1 251 - -
Aed6g0082 252 SMART ANK_2a 75 104 IPR002110 GO:0005515
Aed6g0082 252 SMART ANK_2a 108 137 IPR002110 GO:0005515
Aed6g0082 252 SMART ANK_2a 42 71 IPR002110 GO:0005515
Aed6g0082 252 ProSiteProfiles Ankyrin repeat profile. 108 140 IPR002110 GO:0005515
Aed6g0082 252 ProSiteProfiles Ankyrin repeat region circular profile. 75 102 - -
Aed6g0082 252 PANTHER - 1 251 - -
Aed6g0082 252 ProSiteProfiles Ankyrin repeat region circular profile. 42 69 - -
Aed6g0082 252 SUPERFAMILY Ankyrin repeat 13 180 IPR036770 -
Aed6g0082 252 MobiDBLite consensus disorder prediction 205 246 - -
Aed6g0082 252 PRINTS Ankyrin repeat signature 124 138 IPR002110 GO:0005515
Aed6g0082 252 PRINTS Ankyrin repeat signature 43 58 IPR002110 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0082 11 150 Miscellaneous Gene Families AT5G02620 32.168 2.21e-13 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0082 - - gmx:100812821 416.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0082 6 849454 851081 Aed6g0082 6 849454 851081 ECH