Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2654 ATGAAGTTGTTGTTCCTCTCTCTCACTCTTCTGAGTCTCTCTCTCTCCGTCTCCGCTCGCCACTTCGTCCTCGTCCTCTCCCAGGAAGACTACAAGGACGACCCCCCCGCCGATCCCGACTCCGCCGCCGAGTGGGACGAGTTCGGTGACGGAGACTCCCATAAATCCGAGGATGATCTCGACCCCGGCTCATGGCGCCCCATCTTCGAGCCCCCCGCCGGAGATCCCCAACCCCTCCCCGAATCCGACGCTGCCTACTACTCCGCCGTTTACAAGCTCATGTCCGCCGACCCTCTCCTCATCGAGGACGCCGCCGCCGAGATCACCGCCTTGGCCGAAACCGGCCACCCCGCTGCCCAATCGCTGCTAGGGTTTTTGTGGGGAATGGGGCTTTTGAGAGAGCGAAGCAAGGACAAGGCTTTTTTGTACCACCACTTCGCCGCAGAGGGTGGCAACATGCAATCTAAAATGGCTTTGGCTTACACATACACGCGCCAAGATATGTTTGATAAAGCTGTTAAGCTGTATGGTGAATTGGCTGAAGTGGCTGTGAATAGTTTTCTGATATCGAAAGATTCCCCTGTGATTGAGCCGGTTCGGCTTCACAATGGGGCTGAGGAGAACAAGGAGGCTCTGAGAAAATCAAAGGGGGAAGAGGATGAGGACTTTCAGATACTAGAGTATCAAGCCCAGAAAGGGAATGCTGCTGCCATGTACAAAGTTGGACTCTTTTACTACTTTGGCCTAAGGGGATTGAGGCGCGATCACTCCAAGGCCCTCTCATGGTTTCTCAAGGCTGTCGACAAGGGAGAGCCACGATCTATGGAGCTTCTTGGAGAGATCTATGCTAGTGGTGCAGGTGTCGACAGAAACTACACCAAAGCCTTCGAGTGGCTCACCCTTGCTTCCAGGCACCACCTCTATTCTGCTTACAATGGGATGGGATATTTGTATGTCAAAGGCTATGGAGTTGACAAGAAGAATTACACTAAAGCCAAAGAGTATTTTGAAAAGGCTGCAGAGAATGACGAGGTTGGGGGCGGCCACTACAACCTTGGCGTCATGTATCTCAAGGGGATTGGAGTCAAGAGGGATGTTAAGCTCGCCTGTAAGTTCTTTGTGTTCGCTGCTAACCATGGTCAACCAAAGGCCTTCTACCAGCTGGCTAAGATTTTCCATATTGGTGTTGGCTTCAAGAAGAATATTCCCTTGGCAACTGCACTGTACAAACTAGTTGCAGAGCGGGGTCCATGGAGTTCTTTGTCTAGATGGGCTCTAGAATCATACTTAAAAGGTGATATTGGCAAGGCATTTATGCTGTATTCAAGAATGGCTGAGATGGGCTATGACGTGGCACAAAGTAATGCTGCTTGGATTCTTGACAAATACGGGGAGCGTAGCATGTGCATGGGTGAATCTGGATTTTGCACTGATGCAGAAAGGCATCAGCAGGCACATTCTCTGTGGTGGCAAGCTTCTGAGCAGGGTAATGAACATGCTGCTTTACTCATTGGAGATGCGTATTACTATGGTCGGGGTACTGCTAGGGATTATGAGCGAGCTGCTGAGGCTTACATTCATGCTAAATCACAATCGAATGCACAAGCCATGTTCAATCTTGGATACATGTATGAGCATGGCCATGGACTTCCATTTGACCTTCATCTCGCCAAGCGTTACTATGATGAAGCTCTAGAGCATGATCCTGCAGCGAAGTTGCCAGTCACACTGGCTCTTTCAAGCTTGTGGGTTCGTAAGAACTATGCTGACAGTTTCATGGTACACGTGATTGATTCATTGCCAGAACTGTATCCAAAATTAGAAGCTTGGGTGGAGAATGTGCTTTTGGAGGAGGGAAATGCTACAATTCTGACCCTCTTTGTATGCCTCCTAACTGTGCTGTATCTCCGTGAGAGGCAACGAAGGCAAGCTGCTATTGCTGTTGCAGTTGCAGAGCCAAATCGCCACAATGAGCAGCAGCAGCAGCTTGGTGTGCCCCTCGCACACATCTAG 2013 0.5032 MKLLFLSLTLLSLSLSVSARHFVLVLSQEDYKDDPPADPDSAAEWDEFGDGDSHKSEDDLDPGSWRPIFEPPAGDPQPLPESDAAYYSAVYKLMSADPLLIEDAAAEITALAETGHPAAQSLLGFLWGMGLLRERSKDKAFLYHHFAAEGGNMQSKMALAYTYTRQDMFDKAVKLYGELAEVAVNSFLISKDSPVIEPVRLHNGAEENKEALRKSKGEEDEDFQILEYQAQKGNAAAMYKVGLFYYFGLRGLRRDHSKALSWFLKAVDKGEPRSMELLGEIYASGAGVDRNYTKAFEWLTLASRHHLYSAYNGMGYLYVKGYGVDKKNYTKAKEYFEKAAENDEVGGGHYNLGVMYLKGIGVKRDVKLACKFFVFAANHGQPKAFYQLAKIFHIGVGFKKNIPLATALYKLVAERGPWSSLSRWALESYLKGDIGKAFMLYSRMAEMGYDVAQSNAAWILDKYGERSMCMGESGFCTDAERHQQAHSLWWQASEQGNEHAALLIGDAYYYGRGTARDYERAAEAYIHAKSQSNAQAMFNLGYMYEHGHGLPFDLHLAKRYYDEALEHDPAAKLPVTLALSSLWVRKNYADSFMVHVIDSLPELYPKLEAWVENVLLEEGNATILTLFVCLLTVLYLRERQRRQAAIAVAVAEPNRHNEQQQQLGVPLAHI 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2654 670 Gene3D Tetratricopeptide repeat domain 197 309 IPR011990 GO:0005515
Aed5g2654 670 Pfam Sel1 repeat 309 343 IPR006597 -
Aed5g2654 670 Pfam Sel1 repeat 273 305 IPR006597 -
Aed5g2654 670 Pfam Sel1 repeat 349 380 IPR006597 -
Aed5g2654 670 Pfam Sel1 repeat 235 270 IPR006597 -
Aed5g2654 670 Pfam Sel1 repeat 431 449 IPR006597 -
Aed5g2654 670 Pfam Sel1 repeat 500 522 IPR006597 -
Aed5g2654 670 Pfam Sel1 repeat 117 152 IPR006597 -
Aed5g2654 670 Pfam Sel1 repeat 534 568 IPR006597 -
Aed5g2654 670 MobiDBLite consensus disorder prediction 30 80 - -
Aed5g2654 670 PANTHER ERAD-ASSOCIATED E3 UBIQUITIN-PROTEIN LIGASE COMPONENT HRD3A-RELATED 3 649 - -
Aed5g2654 670 SUPERFAMILY HCP-like 429 570 - -
Aed5g2654 670 SUPERFAMILY HCP-like 216 343 - -
Aed5g2654 670 PANTHER ERAD-ASSOCIATED E3 UBIQUITIN-PROTEIN LIGASE COMPONENT HRD3A-RELATED 3 649 IPR044623 GO:0030433
Aed5g2654 670 SUPERFAMILY HCP-like 102 182 - -
Aed5g2654 670 SUPERFAMILY HCP-like 326 419 - -
Aed5g2654 670 SMART sel1 382 417 IPR006597 -
Aed5g2654 670 SMART sel1 235 271 IPR006597 -
Aed5g2654 670 SMART sel1 534 569 IPR006597 -
Aed5g2654 670 SMART sel1 117 152 IPR006597 -
Aed5g2654 670 SMART sel1 498 533 IPR006597 -
Aed5g2654 670 SMART sel1 346 381 IPR006597 -
Aed5g2654 670 SMART sel1 308 344 IPR006597 -
Aed5g2654 670 SMART sel1 272 307 IPR006597 -
Aed5g2654 670 Gene3D Tetratricopeptide repeat domain 310 425 IPR011990 GO:0005515
Aed5g2654 670 MobiDBLite consensus disorder prediction 47 64 - -
Aed5g2654 670 Gene3D Tetratricopeptide repeat domain 426 586 IPR011990 GO:0005515
Aed5g2654 670 Gene3D Tetratricopeptide repeat domain 101 193 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2654 K14026 - gmx:100787823 1209.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2654 5 27109557 27117324 Aed5g2654 5 27109557 27117324 ECH