Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2570 ATGGAAGAGTCCTCCAACTCCAAGGCGGTTAGTTTAACAGTTGAGGTTGAGCAGGAACAACAACAACAACCTCACGAGGCTGTGTTTCTGGTCTTGGCATATCTTCCAGTGTACGAGTTTGTGGTCATGTCTCAAGTTTGCACATCACTAAGGGATGCTGTGAACAATGACATATTACCATGGTTGAATGTTATTGTTCAAAGGCCTCTCAGTTGGCGACTCAATGATGATATTCTAATCAAAATCACCTCCAAGGCTAATGGTAGCCTCAAAACTCTCGCTCTCATCAACTGCATGCATGTTACGGACGAGGGGCTCCAAAGGGTCGTTGAACACAACTCTCTCATAAACAAGCTCCATATACCAGGATGCACTGGCATAACCCCTGAAGGAGTTCTAAGAGCCGTGAAAACACTATGCCAAAGAAGCGATTGCTTAAAGACCTTAAGTATAGACGGCATCTACAACATACAGAAGGAGCATCTTGACATGCTTATCATGGACCTTGGAAAGAATCAACCACTGGAGGAGCAGCAAAAGCAGCAGCCTGTCTACTATCACCAACGTGTCGACTTTTCGGTATTTAGGCATGAAGAAAGCCAGCGGCTTATTGATTTGGAGATATGTCCCAGGTGCTTTGAGGTGAGGATGGTTTATGATTGCCCCAAAGGGCACTGCACGGGGAGGGAATGGCCCCTAGCTCCATGTAGGGGCTGCAAATTTTGTATTCCAAGGTGTGAAAACTGTGGTGGATGCATTGAATCTGGAGAAGTGGAAGAGGGAGCCTGTGAAGATATCTTCTGCCTCGAGTGTTGGTTACTGCTTCCCAAGTGCAGTTTCTGTAACAAACCATACTGTAAGCAACACACAAATTGGTGGTGCACTTCTTCAGACTCTTCATTTATCTGTAAAGTTTGTGATGAAAATTCTCATGGATATACGTATACTACTGATGTTCTATAA 963 0.4465 MEESSNSKAVSLTVEVEQEQQQQPHEAVFLVLAYLPVYEFVVMSQVCTSLRDAVNNDILPWLNVIVQRPLSWRLNDDILIKITSKANGSLKTLALINCMHVTDEGLQRVVEHNSLINKLHIPGCTGITPEGVLRAVKTLCQRSDCLKTLSIDGIYNIQKEHLDMLIMDLGKNQPLEEQQKQQPVYYHQRVDFSVFRHEESQRLIDLEICPRCFEVRMVYDCPKGHCTGREWPLAPCRGCKFCIPRCENCGGCIESGEVEEGACEDIFCLECWLLLPKCSFCNKPYCKQHTNWWCTSSDSSFICKVCDENSHGYTYTTDVL 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2570 320 PANTHER MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B 15 313 - -
Aed5g2570 320 Gene3D Ribonuclease Inhibitor 4 175 IPR032675 -
Aed5g2570 320 SUPERFAMILY F-box domain 24 74 IPR036047 GO:0005515
Aed5g2570 320 Pfam F-box domain 24 59 IPR001810 GO:0005515
Aed5g2570 320 ProSitePatterns 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 236 247 IPR017900 -
Aed5g2570 320 PANTHER F-BOX PROTEIN SKIP28 15 313 - -
Aed5g2570 320 SUPERFAMILY RNI-like 79 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2570 Aed-Chr5 26543755 26548453 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2570 - - vra:106769044 565.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2570 5 26543755 26548453 Aed5g2570 5 26543755 26548453 ECH