Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2557 ATGAACATGAAGATGAAGAATAAGCAGCAGCAGCAAGAAGCGAGAGTCGTGAGTGCTTCTCAATTATCACACATGTTCAGCTTCTTCTCTCATGTTCTAGTATTTGCCTCTGGTTTGCTCATTGGAATCATCCTCGTCACTTTCTCTCTCAAAAACTTGTCCCTCAACTTTCAATTCCACCAACTCTTCCTTCCATCCCTCCAATCATTGTCTCCTCCTCCTCTCGTCAACTTCAATAATAATAATAATCACACAAATGGTTTGTTGAGGCCAACCAATGCTACTAGCGCTATGCATGACATGACAGAGGAAGAGTTGCTGTGGAAAGCTTCTATGGTTCCTATGATTAAGGAACTTCCTTACAAATACAAACACACCCCAAAGGTTGCATTCATGTTTTTGACAAAAGGGTCTGTCCTTTTGGCTCCACTATGGGAGAGATTCTTCAAAGGAAATGAAGGCTTCTATTCCATCTATGTCCATTCACATCCTTCTTTCAATCACACTGTGCCTCTAACTTCTGTCTTTCATGGCCGCAGAATCCCAAGCAAGGAGGTAAGATGGGGTGACTTCAACATTGTAGGGGCAGAGAGACGGCTCCTGGCGAATGCACTACTTGACTTCTCAAACGAACGTTTTGTTCTAGTCTCAGAGTCATGCATTCCTTTGTTCAACTTCTCAACAATCTACAACTACCTTATGAACTCAACCATGACTTTTGTGGAAGCCTATGACTTGGCAGGTGCAGTTGGGAGAGGCAGGTACAACCCAAGAATGAAGCCACTAGTTCGTCTTTCACAGTGGAGAAAGGGTTCACAATGGTTTCAAATAGACCGTGGACTTGCCATTCAGATTGTCTCTGACCACCAATACTTCCCATTGTTCAACAAGTATTGCAGGAATGGATGCTATGGTGATGAGCACTACTTGCCAACTTTTGTTAGTATCATGTTTTGGAAGAGGAACTCCAACAGAACTTTGACTTGGGTTGATTGGTCAAAGGGTGGACCCCATCCAGCTAGGTTTCTCAGACAAGATGTCACTCTTGATTTTTTTAAGAGGCTAAGGTATGGGACAACATGTCAGTACAATGGCAAGACCACCAATATTTGTCACTTGTTTGCAAGAAAATTCACTCCACAGGCTTTAGATAGATTGCTCAGGTTTGCTCCACAGATAATGCAATTTAATTGA 1194 0.4263 MNMKMKNKQQQQEARVVSASQLSHMFSFFSHVLVFASGLLIGIILVTFSLKNLSLNFQFHQLFLPSLQSLSPPPLVNFNNNNNHTNGLLRPTNATSAMHDMTEEELLWKASMVPMIKELPYKYKHTPKVAFMFLTKGSVLLAPLWERFFKGNEGFYSIYVHSHPSFNHTVPLTSVFHGRRIPSKEVRWGDFNIVGAERRLLANALLDFSNERFVLVSESCIPLFNFSTIYNYLMNSTMTFVEAYDLAGAVGRGRYNPRMKPLVRLSQWRKGSQWFQIDRGLAIQIVSDHQYFPLFNKYCRNGCYGDEHYLPTFVSIMFWKRNSNRTLTWVDWSKGGPHPARFLRQDVTLDFFKRLRYGTTCQYNGKTTNICHLFARKFTPQALDRLLRFAPQIMQFN 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2557 397 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 9 396 IPR044174 GO:0016757
Aed5g2557 397 Pfam Core-2/I-Branching enzyme 129 355 IPR003406 GO:0016020|GO:0016757
Aed5g2557 397 PANTHER CORE-2/I-BRANCHING ENZYME 9 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2557 Aed-Chr5 26439501 26441694 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2557 - - gmx:100815747 622.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0222 7 1583599 1588002 Aed5g2557 5 26439501 26441694 ECH
Aed5g2557 5 26439501 26441694 Aed5g2557 5 26439501 26441694 ECH
Aed5g2557 5 26439501 26441694 Aed7g0222 7 1583599 1588002 PCT