Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2556 ATGGCGGGGTCTTCGTTAATGGAGAATCTCTTCCAGCGCACGCTGGAGGATCTGATCAAAGGCATGCGGCTCCAGCTTGTTGGCGAATCCACCTTCATCTCGAAGGCCACGGAGGAGATCCGCCGCGAGATCAAATCCACCGACCAGCACACCAAATCCACCGCGCTCCACAAACTCTCTTACCTCTCTGCCGTGCACGGCGTCGACATGTCTTGGGCTTGCTTCCACGTGGTGGAGGTGATGTCCTCCTCCAAGTTCGCGCACAAGAGGATCGGTTACCAGGCGGCGTCGCAGTCCTTCCACGACGACACTCCGGTGCTCCTCCTTATCACCAACCAGCTCCGCAAGGACCTCTCCTCCACCAACGAGTTCGAGGTAAGCCTCGCCCTCGATTTGTTGTCGCGAATCGCCACTCTCGACCTCGCTCGCGATTTGACCCCCGAGGTTTTCAAATTGCTCTCCACCGCTAGGGTTTTCGTTAGGAAGAAGGCTATTGCCGTCGTTTTGAGGGTTTTCGATAAGTACCCCGACGCGGTCCGGGTTTGCTTCAAGCGTTTGGTTGAAAATCTAGAAAGTTCCGATCCTCAGGTTGTCACCGCGGTGATCGGGGTTTTCTGTGAGCTGGCTTCTAAGGATCCGAGGTCGTACCTTCCCTTGGCTCCCGAGTTTTATAGGATTTTGGTTGATTCTAAGAACAATTGGGTTCTGATTAAGGTGCTCAAGGTGTTTGCTAAGTTGGCTCCCTTGGAACCTAGGTTGGGGAAGAGGATCGTTGAGCCTGTTTGTGACCATATGAGGCAGTCCGGGGCCAAGTCCTTGGTGTTTGAGTGTGTTAGGACTGTGCTCACTAGCTTGAGCGATTATGAGTCTGCTGTTAAGCTCGCGGTTGAGAAGGTTAGGGAGTTGTTGGTTGATCAGGATCCCAATCTTAGGTATCTTGGTCTGCAGGCGCTTTCGGTTGCTGCGCCCGAGCACTTGTGGGCGGTGACGGAGAATAAGGAGGCCGTGGTTAAGTCGCTCAGTGACGATGATTCGAATATCAAGATTGAGTCACTGCGATTGTTGATGGCCATGGTGTCTGAGAGCCATGTGGCTGATATCTCCAGGGTGCTGCTTAATTATGCATTGAAGTCTGACCCCGAATTTTGCAATGAGATTTTGGGTTCCATTTTGACGACATGCTGTAGAAATGTGTATGAGATTGTTGTTGACTTTGATTGGTATGTGTCTCTTCTTGGAGAAATGGCAACTATTCCTAATTGCCAAAAGGGGGAAGAGATCGAGACTCAGCTTGTTGATATTGGCATGAGAGTTAAGGATGCTAGAATCCAGCTTGTTCAGGTTAGCCGGGATCTGTTGATTGACCCTGCATTGCTGGGTAATGTGCACTTGCATAGGATATTGTGTGCTGCTGCTTGGGTTGCTGGAGAGTATGTCGAGGTTGTGGGAAATCCCTTTGAACTCATGGATGCACTCCTACAGCCTCGTACCAGTCTCTTGCCACCATCAATAAGAGCAGTTTATATTAATTCTGCTCTTAAAATTTTAATTTTTTGCCTGGACTGCTACCTTCTGCAAAATGAAGGTTCTGCATCTTGGTATTATTCTGATACTTTGGCTGGGGGACAGTCAGATTTGTTTAGTGTAAAAAATGACACCGAGGCTGCTGAATTGGCAACATGTGAAGGTTCAAATTATGAACAGCATGAGGGTTTTAACCCAAGGAATACAACTGAATCTTCTGAGGATCTTTCTGTTGAAATTAACATAGCTAGAGTTGCCAGTCATGGTCAAACATCTGCACCTCATACTCTCTCGGCGAAGAAGAATTCCATGCATGATTCTATTGTAAGCCTATTGAATCGAATTGAATTAATTTTTGGCCCACTAATAGCAAACCAGGATGTTGAAGTGCTGGAGAGATCACGAAACATACTTTCCCTTGTTCAGTTGATTAAAGAAGAAATAATCGATAATTCAGTCCAGAGTGTGAACATTATGGACAAGAACGATACTCGAGTTTTGGCTATTATCAATTTGCTGCGTGATGCTTTTACTACGGAACTTGGTCCAGTCTCAACAAGTGCACAGGGAAGAATTGTTGTGCCAGATGGATTAGTTCTTAAAGAAAATCTTGATGACTTAGAAGCAATATGTGGTGATATTGAACTACCTCCATCTAGTTCGTTTGCCACAGGAGGCCCTCACCTTGCCACTACTTCGGATGCTTCTTCATCTAATCTTCTGAAAAATGAAGAGTCAGGGTCATTGAAGGAATCCCCATTGATTGAACACCGTAAGCGGCATGGATTATATTATCTTCCTTCAGAGAAGAGTGAGATTGTTCCAGACGAGTATCCTCCTGCAAATGATCCAAAGTCAAACAGTAATATAAATGATGAAGCTGCAGAGCTAGTCAAGCTGACAGAGCAATCACTTCTTCTCAAGAAAAGGACAAACCAAACAAAGCCCAGGCCTGTAGTGGTGAGATTGGATGATGGAGACGGGGCACCAATTTCAGTCAAAAGGCCAGAGCCAAGGGATGATTCTCTTTCTGGTGCCATAAAAGATGTTCTTCTAGGAAGCGAAACCGGACCAAGTATGTCTCAAAGCAATCCTTCTGATAAGTCATCAAGGAAGAAGAAAGAGAAAAGGAAACTAAGCACAAATGTTCGATCTGAAATGAAGGAAAATGTAGTCGATGCAGAAAAGCCTGACCTTGAAAATCCAAATTCAAGTAGCAAAAACCATGGTCATAGTCATACTAAAGAGAGAAGACACAGAGGAAAAGAAAAGATTGTTGACGGGGAAGCACATCATCAAAGGGAAAAGAAAAAGGATGGCCACCGCCATGGGAGGCGAAAAACTCATCAAAGAGCAAAGTCGCCCTTAAACGTAGTTTCCCAAACCCCAGTAATTCCAGATTTCCTTTTATAG 2937 0.4603 MAGSSLMENLFQRTLEDLIKGMRLQLVGESTFISKATEEIRREIKSTDQHTKSTALHKLSYLSAVHGVDMSWACFHVVEVMSSSKFAHKRIGYQAASQSFHDDTPVLLLITNQLRKDLSSTNEFEVSLALDLLSRIATLDLARDLTPEVFKLLSTARVFVRKKAIAVVLRVFDKYPDAVRVCFKRLVENLESSDPQVVTAVIGVFCELASKDPRSYLPLAPEFYRILVDSKNNWVLIKVLKVFAKLAPLEPRLGKRIVEPVCDHMRQSGAKSLVFECVRTVLTSLSDYESAVKLAVEKVRELLVDQDPNLRYLGLQALSVAAPEHLWAVTENKEAVVKSLSDDDSNIKIESLRLLMAMVSESHVADISRVLLNYALKSDPEFCNEILGSILTTCCRNVYEIVVDFDWYVSLLGEMATIPNCQKGEEIETQLVDIGMRVKDARIQLVQVSRDLLIDPALLGNVHLHRILCAAAWVAGEYVEVVGNPFELMDALLQPRTSLLPPSIRAVYINSALKILIFCLDCYLLQNEGSASWYYSDTLAGGQSDLFSVKNDTEAAELATCEGSNYEQHEGFNPRNTTESSEDLSVEINIARVASHGQTSAPHTLSAKKNSMHDSIVSLLNRIELIFGPLIANQDVEVLERSRNILSLVQLIKEEIIDNSVQSVNIMDKNDTRVLAIINLLRDAFTTELGPVSTSAQGRIVVPDGLVLKENLDDLEAICGDIELPPSSSFATGGPHLATTSDASSSNLLKNEESGSLKESPLIEHRKRHGLYYLPSEKSEIVPDEYPPANDPKSNSNINDEAAELVKLTEQSLLLKKRTNQTKPRPVVVRLDDGDGAPISVKRPEPRDDSLSGAIKDVLLGSETGPSMSQSNPSDKSSRKKKEKRKLSTNVRSEMKENVVDAEKPDLENPNSSSKNHGHSHTKERRHRGKEKIVDGEAHHQREKKKDGHRHGRRKTHQRAKSPLNVVSQTPVIPDFLL 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2556 978 PANTHER DELTA ADAPTIN-RELATED 3 977 IPR017105 GO:0015031|GO:0030123
Aed5g2556 978 PIRSF AP3_delta 1 971 IPR017105 GO:0015031|GO:0030123
Aed5g2556 978 MobiDBLite consensus disorder prediction 732 754 - -
Aed5g2556 978 MobiDBLite consensus disorder prediction 887 910 - -
Aed5g2556 978 MobiDBLite consensus disorder prediction 836 852 - -
Aed5g2556 978 MobiDBLite consensus disorder prediction 928 943 - -
Aed5g2556 978 Pfam Adaptin N terminal region 31 503 IPR002553 GO:0006886|GO:0016192|GO:0030117
Aed5g2556 978 SUPERFAMILY ARM repeat 30 664 IPR016024 -
Aed5g2556 978 MobiDBLite consensus disorder prediction 944 960 - -
Aed5g2556 978 MobiDBLite consensus disorder prediction 816 978 - -
Aed5g2556 978 MobiDBLite consensus disorder prediction 730 762 - -
Aed5g2556 978 Gene3D - 4 538 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2556 Aed-Chr5 26435341 26438277 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2556 K12396 - gmx:100815221 1712.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2556 5 26435341 26438277 Aed5g2556 5 26435341 26438277 ECH