Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2554 ATGCTTCTTGAGTCAAATCATGACTTTGAGTTCAGTTCCAGCATAAGCCTTGAGTTTGAATCATCTTCTGCAGATGAGCTTTTCTCTAATGGGGTGATCCTTCCCATTCAGATGCAGAAAAGGAAGAACCCTACTCGGAGACACACCCTTTTTGGAGAAGCTCCATATATGAGACTTCCTCCACTTCCAATGACCCCTAGCGTTGACAAAATGAAGAGAGATGTGAATGCTAGTTACTGTGATCATAAGAAAACTAACTCCACCTCCTTCTGGGGTTTCAGCAGAAGCAAAAGTTTGAGTTGTGATACAAAGAAAAGTTTGATGTGTTATTCACCTCCTTTGTCAAGGAGCAACTCAACTGGTTCAGTGGCACAGCCAAAGAGAGTGAGTTCAATCAGGCAGCAGCATTCAGCAGCAGTAGCTAAGGCACTCTCATCATCTTCAACTTCTAATAATCTGTATCCTATACAAAGGTCTCATTCAGATGTTCTAGCAAAATGA 501 0.4192 MLLESNHDFEFSSSISLEFESSSADELFSNGVILPIQMQKRKNPTRRHTLFGEAPYMRLPPLPMTPSVDKMKRDVNASYCDHKKTNSTSFWGFSRSKSLSCDTKKSLMCYSPPLSRSNSTGSVAQPKRVSSIRQQHSAAVAKALSSSSTSNNLYPIQRSHSDVLAK 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2554 166 MobiDBLite consensus disorder prediction 114 158 - -
Aed5g2554 166 MobiDBLite consensus disorder prediction 114 166 - -
Aed5g2554 166 PANTHER BNAANNG22500D PROTEIN 2 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2554 Aed-Chr5 26415780 26417198 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2554 - - gmx:100814700 224.942
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0219 7 1555913 1556635 Aed5g2554 5 26415780 26417198 ECH
Aed3g0066 3 574966 575775 Aed5g2554 5 26415780 26417198 ECH
Aed3g1127 3 9259010 9259846 Aed5g2554 5 26415780 26417198 ECH
Aed1g1864 1 15995770 15996567 Aed5g2554 5 26415780 26417198 ECH
Aed5g2554 5 26415780 26417198 Aed5g2554 5 26415780 26417198 ECH