Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2544 ATGCTGCTATGTCCGAAAGAAGAAGCACTTGTTAAATTGTTGTACAATAATGTCTCTACCCCTTTCCACCTTCTCTTCCTCATTCTCTTCTCCTCTGCCATTTTCCTTCTCACCTTCTTAACCTTCACTGGCAGATTCCCCTTAATCCAAAGGGATCAAGAATATGAATACGTGTATACCGAGGATGAAGAAGAAGAAACTGAAGAAGGGTATTCTTGTGTTGATTCGACTGAGAGATGCAAGGAGGGTCGTGTGTCTCTGCACCATGAGGGTAATCAGAGGACTAATTCTTATTCAGAAGAAGAATTCATAAGCCCCGAGGAGAGCTTGAATGATGAGTCAGAAGAAGAAAAGCATTATTATTCTCAAACGTTGTCTGAAGAGGCAGAAACGGTTGAAGAAGACTTTCTAGCAGCGAAAGAAGCTGATTCTGCCCAAGTTCAAAGCAGGACCACCTCTCCCATCAACCTCACCGCATACAAAACAAACAAAAACCGTCACGACGATCATGTTAGCGTTGAAATAATTAAAAATAAGAAAGTGCAAGAGGCAAACGTGGGAAGGGATGAGAGATACTTTGTGTATGCTTCTACCCAATTGCAGAGTAAGAAGCTAATGATCGAAGAGAGGGATGATGAGTCCTCTAAATGGAAGAGCTCCATCAATTGCAGGGATTCCGAGACTGAAGACGCATTATCTTCCTCATCAAGAAGTTGCCCCAAGTGGGAATCATATACATTGTTCCAAAAGTATGATGAAGAAATGGCAATCCTAGACAGAATTAGTGCACAGAAACTTCATGAGACTGAGTCATTAAGGTCCATCCAAATGTCTCCAAGATCAATGTCAGAGAGTATTGTGTACAAGTTTCAAACTATAAATAAAAAGATCGGTGATGTTGGTCACAACCCATATCGTGAACTAGAGGCTGCATATGTGGCACAAATTTGCTTAACATGGGAAGCCCTTAGTTGGAACTACAAGAATTTTCGTTCCAAACATGCCTCACGCCAGAATCATGATACCGGTTGTTCTGCCACCGTTGCGCAACAATTCCAGCAATTTCAGGTTTTGTTACAGAGATACATTGAGAATGAGCCTTATGAGCATGGTAGAAGACCTGAGATATATGCTAGAATGAGGCTTTTGGCACCAAAATTGCTCCTAGTGCCAGAATATCAAGATTCAGAGGAGGATGAGAAGGATGGTGGTTTTCAATGCAAAATATCATCAGCTTCATTTCTAAAGATAATGGAGGACGGGATCAAGACATTCATGAATTTTCTGAAGAATGATAAAGAGAAACCCTGTCAGATCCTAGCAGCCTGCTTTAGGAGAAACCAAAGAGGCACAGTTGATCCAACACTACTCCGACTAATGAAGAAGAAGAGGGTGAAGGTTAAGGATCTTAACCATGCTGCAGGGAAATGCTTGAGGAAGAGAAAGTTAAAGGTGGAAAAGGATATGGATATTTTGATGGCACTCATAGACCTAAAAGTGGTGTCAAGGGTTTTAAGAATGAATGAGTTAAGTGAAGAGCAGTTGCATTGGTGTGAGGAGAAGATGAGCAAAGTGAGAATCATGGAAGGGAAACTTCAAAGAGATTATTCCATCCCACTTTTCTTCCCCTCCCATTAA 1638 0.4133 MLLCPKEEALVKLLYNNVSTPFHLLFLILFSSAIFLLTFLTFTGRFPLIQRDQEYEYVYTEDEEEETEEGYSCVDSTERCKEGRVSLHHEGNQRTNSYSEEEFISPEESLNDESEEEKHYYSQTLSEEAETVEEDFLAAKEADSAQVQSRTTSPINLTAYKTNKNRHDDHVSVEIIKNKKVQEANVGRDERYFVYASTQLQSKKLMIEERDDESSKWKSSINCRDSETEDALSSSSRSCPKWESYTLFQKYDEEMAILDRISAQKLHETESLRSIQMSPRSMSESIVYKFQTINKKIGDVGHNPYRELEAAYVAQICLTWEALSWNYKNFRSKHASRQNHDTGCSATVAQQFQQFQVLLQRYIENEPYEHGRRPEIYARMRLLAPKLLLVPEYQDSEEDEKDGGFQCKISSASFLKIMEDGIKTFMNFLKNDKEKPCQILAACFRRNQRGTVDPTLLRLMKKKRVKVKDLNHAAGKCLRKRKLKVEKDMDILMALIDLKVVSRVLRMNELSEEQLHWCEEKMSKVRIMEGKLQRDYSIPLFFPSH 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2544 545 MobiDBLite consensus disorder prediction 90 104 - -
Aed5g2544 545 PANTHER DUF1666 FAMILY PROTEIN 4 545 - -
Aed5g2544 545 MobiDBLite consensus disorder prediction 86 120 - -
Aed5g2544 545 PANTHER DNA LIGASE (DUF1666)-RELATED 4 545 - -
Aed5g2544 545 Pfam Protein of unknown function (DUF1666) 307 543 IPR012870 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2544 Aed-Chr5 26360455 26362593 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2544 - - gmx:100776190 855.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2544 5 26360455 26362593 Aed5g2544 5 26360455 26362593 ECH
Aed5g2544 5 26360455 26362593 Aed7g0202 7 1432538 1436107 PCT