Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2536 ATGGCTCCGAAATTGGCGAAATCAGGATCTTTTCGTCATGGATTTGCGGAGAAGAAGGAGAAGCTTCTCTCTGCGAAGAGTAGTTACTCTGAGATAGGGATTGGTGTGATGAAGCACGAAGAAGAGGAATCGGGGATGATGGTGAAGTTGCGGAACGTGATTGGGAAGGCATGGGAAATGGGTCGGTCTGATCCAAGGAAGATCATTTTCTCTGCAAAATTGGGCCTTGCTCTCACTATTCTCTCCCTTTTGATTTTCCTCAAAGAACCCTTCGCGGATTTGAGCAGCTACTGTGTCTGGGCCATTCTAACTGTTGTCGTTGTCTTTGAATTCAACATAGGGGCAACTCTGAGCAAAGGGGTAAACGGTGGATTGGGGACCTTGTTGGCTGGAGGACTTGCTGTGGGGATGGCTGAGTTATCAACATTGGGTGGAAAATGGGAAGAACTTATAATTATTTTGTGCACCTTCATTGTAGGATTCTTTGCCACCTATACAAAACTATATCCTACTTTGAAGCCTTATGAATACGGGTTCCGCATGTTCTTGATCACCTATTGTTTCATTACTGTATCCGGGTATCAAACAGGGGAATTTGTCGATACAGCTATAAATAGATTTGTTCTCATTGCACTTGGTGCTGCTGTATCTTTGGGAGTAAATATCTGCATATATCCAATCTGGGCTGGTGAGGATCTGCATGATCTTGTCACCAAAAATTTCATGGGTGTTGCAACATCTTTGGAAGCTGTTGAATCTACTAGTAAAGAAGATTCATTGATGGGATTTGCTGTCTGGGAACCACCACATGGTCATTACAAAATGCTTAAATATCCATGGAAGAATTATGTGAAATTAAGTGGGGCTTTAAGGCATTGTGCATTTACGGTCATGGCTATGCATGGATGCATGCTTTCTGAAATACAGGCCCCAGCTGAGAAGAGACAAGTTTTCTGCAGTGAGCTTCAGAGGGTAGGCTCTGAAGGGGCAAAAGTGTTGCGTGAACTTGGAAACAAAGTTAAAAAGATGGAGAAACTAGATCGGAGAGACTTGCTGTTTGAAGTGCATGAGGCAGCAGAGGAATTGCAACAGAAGATTGACAAAAAATCTTACCTTCTTGTCAACTCAGAGAGCTGGGAAATTGGAAATCACTCAAGAGAAGAAGAGAGTTATTCTCATTCTCAACAACAAGGGCTCTTTAACATGGACGAAGAAAGAAAATTTCTCGAGTGCAAGTCTCTGAGTGAAGCAGTACTTGATCTCAGAACAGTTGAAGTTCCAAATACTTGGGAAGGAAATTTAACTCTAGGCAATAATAATAACCCTGAAAACATGTTCAGGAAAAAGATATCTTGGCCTTCTCATATTTATTACCATAAATCAAATGCCGAGGCTGAAGAGGGGCAAGAATCAAAAACTTACGAAAGTGCTAGTGCGCTATCTCTAACAACATTTACATCGCTTCTAATTGAATTTGTAGCAAGGCTTCAAAACCTGGTGGATTCATTTGAGGAATTAAGTGAAGTAGCAAACTTTGCTGACCCCCCTGAGCAACAACAAGCACCAGTAGCATCTCGTGGGTTTTGGACCAGGTTGTGTAACTGCTTAAGATTCAAGGATTGA 1623 0.4208 MAPKLAKSGSFRHGFAEKKEKLLSAKSSYSEIGIGVMKHEEEESGMMVKLRNVIGKAWEMGRSDPRKIIFSAKLGLALTILSLLIFLKEPFADLSSYCVWAILTVVVVFEFNIGATLSKGVNGGLGTLLAGGLAVGMAELSTLGGKWEELIIILCTFIVGFFATYTKLYPTLKPYEYGFRMFLITYCFITVSGYQTGEFVDTAINRFVLIALGAAVSLGVNICIYPIWAGEDLHDLVTKNFMGVATSLEAVESTSKEDSLMGFAVWEPPHGHYKMLKYPWKNYVKLSGALRHCAFTVMAMHGCMLSEIQAPAEKRQVFCSELQRVGSEGAKVLRELGNKVKKMEKLDRRDLLFEVHEAAEELQQKIDKKSYLLVNSESWEIGNHSREEESYSHSQQQGLFNMDEERKFLECKSLSEAVLDLRTVEVPNTWEGNLTLGNNNNPENMFRKKISWPSHIYYHKSNAEAEEGQESKTYESASALSLTTFTSLLIEFVARLQNLVDSFEELSEVANFADPPEQQQAPVASRGFWTRLCNCLRFKD 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2536 540 Pfam Aluminium activated malate transporter 58 251 IPR020966 GO:0015743
Aed5g2536 540 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 1 251 - -
Aed5g2536 540 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 250 539 - -
Aed5g2536 540 PANTHER ALUMINUM ACTIVATED MALATE TRANSPORTER FAMILY PROTEIN 1 251 - -
Aed5g2536 540 PANTHER ALUMINUM ACTIVATED MALATE TRANSPORTER FAMILY PROTEIN 250 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2536 Aed-Chr5 26305884 26310452 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2536 6 515 Miscellaneous Gene Families AT3G18440 57.241 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2536 - - gmx:100813638 852.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0187 7 1319854 1325256 Aed5g2536 5 26305884 26310452 ECH
Aed5g2536 5 26305884 26310452 Aed5g2536 5 26305884 26310452 ECH
Aed5g2536 5 26305884 26310452 Aed7g0187 7 1319854 1325256 PCT