Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2527 ATGGCAGCTTGCAACAGTTTCTCTTGGCTCATACTTTCATCCAACAACGTGAAACGCGATCCCTTCTTCTTCGTCCCAACCTCAACCTCAACCTGCTTCAAATTCAATGCTCCCGTTGTTGCTTCACAAATTCAATGGCATTCAGATTCATATACCAGCAGAAACATCCCCCAAATCAAACGCCATTGGGTCGAAGCTTCTGATCACTCGCTCGCATCTCCACGATTCAGTGTGGCGTCATACAACATACTGGGGGATAGAAATGCTTCTCAACACTCGGATTTATACGTAAACGTTCCTTCTCATTACATCAACTGGGGCCATCGCAAGAGGCTTATTTGTGATGAACTCTTTGGATGGGACCCTGATATCATCTGCTTACAAGAGGTGGACAAGTATTTCGAACTCTCAGACATTATGGTTAAAGCAGGATATGCAGGATCTTATAAGAGACGCACTGGAGATACAGCTGACGGTTGTGCGATGTTTTGGAAAGCTGATAAGTTCCGGTTACTAGAAGGAGAGAGCATTCAATTTAAGAACATTGGCCTTCGTGATAATGTTGCCCAACTTTCAGTTTTTGAGATGTGTGATTCTGACTCAAGAAGACTGTTAATCGGTAACATCCATGTACTTTACAACCCAAACAGGGGAGAAGTTAAGTTAGGTCAAATTCGTTTTCTCTCATCAAGAGCACAGTACCTCTCAGAGAAATGGGGTAATACGCCTGTTGTGCTAGCTGGTGATTTTAATAGTACTCCTCAGAGTGGAATATACAAGTTCTTGTCATCATCTGAGCTTAATATCATGCTGTATGACAAAAAGGAATTATCTGGACAGAAACGTTGTCGTCCTGCTCAAAATGCACTTTTATCTCGGTATGATGCTCTAAACCCTGCTGTTTCCAGCTTTTTAAAGTGCTGGACAGATGAAGAGGTAAAAATAGCAACTGGAGATTCTGAGCGTCATTTGGCTGTGCATCCATTGAAGCTGAATAGTTCGTATGCCACAGTTAATGGTTCAACTAGTACACGGGGATTCAATGGTGAGCCCTTGGCAACTTCCTATCACTCAAAGTACTCAAATGGTATAGTACCTACAAGAGTTCTTGATACCGTTTCAATAAGTGATCTCCTAAGGGAAGGTGGCCTCCCATGCAAGAAAGTGGGAAGCGACCATTTGGCCTTGGTTTCTGAATTTTCTTTCTCAGTTACCAACAATGACCCTACAGACAAAGTGGCAGCAGCAGCATCACCTATAGTAGATATTGAAGAACCTAACAATCAGCAGTCATAA 1296 0.4267 MAACNSFSWLILSSNNVKRDPFFFVPTSTSTCFKFNAPVVASQIQWHSDSYTSRNIPQIKRHWVEASDHSLASPRFSVASYNILGDRNASQHSDLYVNVPSHYINWGHRKRLICDELFGWDPDIICLQEVDKYFELSDIMVKAGYAGSYKRRTGDTADGCAMFWKADKFRLLEGESIQFKNIGLRDNVAQLSVFEMCDSDSRRLLIGNIHVLYNPNRGEVKLGQIRFLSSRAQYLSEKWGNTPVVLAGDFNSTPQSGIYKFLSSSELNIMLYDKKELSGQKRCRPAQNALLSRYDALNPAVSSFLKCWTDEEVKIATGDSERHLAVHPLKLNSSYATVNGSTSTRGFNGEPLATSYHSKYSNGIVPTRVLDTVSISDLLREGGLPCKKVGSDHLALVSEFSFSVTNNDPTDKVAAAASPIVDIEEPNNQQS 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2527 431 Pfam Endonuclease/Exonuclease/phosphatase family 79 262 IPR005135 GO:0003824
Aed5g2527 431 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 45 404 - -
Aed5g2527 431 SUPERFAMILY DNase I-like 72 410 IPR036691 -
Aed5g2527 431 Gene3D Endonuclease/exonuclease/phosphatase 48 418 IPR036691 -
Aed5g2527 431 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 3 45 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2527 Aed-Chr5 26255753 26260929 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2527 74 264 EF-hand Containing Proteins AT5G54130 28.986 1.59e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2527 - - gmx:100779393 747.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2527 5 26255753 26260929 Aed5g2527 5 26255753 26260929 ECH