Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2307 ATGGGTGAAAAAGAGACAGAGAAGCTAATTTGGGAACAGATGAGAACCCCCACAGCTGGCACACCATACCGAACATTGCCGAAGCTTCTACTCCTTCTCATCCTCTTCGTCTCCGTCACCTACGTCGTTTACACGCTCAAGCTTGTCTCCACCTCACGCGCCTGCAACGACGCCCCATTCTCCACCGACACCTTCTCCAAAACAATCCACGCCGTCAATGCCACCGCCGCCGTTCTCCGACGAGGCTCCCGCGAGACCAACTCCGAAGACCGGACCGACCACCGCCACGTGGTGTTCGGAATCGCGGCGTCGGCGAAGCTATGGGAGCAGAGAAAGAGCTACATCAAGCTCTGGTACCGGGCGAGGGACATGCGCGGCGTGGTGTGGCTCGACGAGAAGGTGGAAGAATCGGGGGAGAACAGCGACGCGCTCCCGCCGGTGAGAATATCCGGCGACACCGCGAGGTTCAAGTACACGAACAAGCAGGGGCACAGGTCGGCGATTAGGATCTCGCGGATCGTGTCGGAGACGCTGCGGCTGGGGATGAAGGACGTGCGGTGGTTCGTGATGGGCGACGACGACACCGTTTTTGTAACGGAAAACCTAATTCGCGTGTTGAGAAAATACGACCACAATCAGTACTATTACATTGGGAGTTTGTCGGAGAGTCACTTGCAGAACATTTTCTTCTCTTATAATATGGCCTATGGTGGAGGTGGTTTTGCGATTAGTTATCCTTTAGCGAAGGCTTTGTACAAAATGCAGGACCGTTGCATTCAGCGTTACCCAGGTCTCTATGGTTCCGATGATAGAATGCAAGCGTGTATGGCCGAACTCGGTGTTCCACTCACCAAGGAAATCGGTTTTCACCAGTATGATGTATATGGAAACCTGTTTGGCCTTCTTGCATCTCATCCCGTGACTCCATTGGTATCACTGCACCACCTTGATGTGGTTGAGCCAATCTTCCCCAATGTGACCCGTGTAGAAGCCCTTCAACGGTTCACTATACCAATGAAGCTTGACTCAGCAGGGCTCATGCAGCAATCCATCTGCTATGACAAATCAAAGAGCTGGACGGTTTCCATTTCATGGGGCTTTGCTGTTCAGATATTTCGGGGCGTGTTTTCACCACGTGAGATGGAAATGCCTTCAAGAACATTCTTGAATTGGTATAGAAGAGCAGATTACACTGCATATGCATTCAACACACGTCCAGTTAGCCGAAATCCATGCCAGAAGCCTTTTGTATTTTACTTCTCAAAGGCAAAATACAATTCTACAATGCAACAAATAGTGAGTCAATATGAAAGGTATCCCGTCCCTCATCCAGATTGCAAGTGGAAGATGGCTAATCCTGCTTCTCTTGACAAAGTGAAGGTATACAAGATGCCAGATCCGCATCTATGGGATAGAGCTCCAAGGAGAAACTGTTGCAGAGTGAAGAAGTCGAAGGAGAAAGGGACCATGGTGATAGAAGTGGGGGTGTGTGGGGAAGGTGAGGTAAGTGAAACATAA 1518 0.5053 MGEKETEKLIWEQMRTPTAGTPYRTLPKLLLLLILFVSVTYVVYTLKLVSTSRACNDAPFSTDTFSKTIHAVNATAAVLRRGSRETNSEDRTDHRHVVFGIAASAKLWEQRKSYIKLWYRARDMRGVVWLDEKVEESGENSDALPPVRISGDTARFKYTNKQGHRSAIRISRIVSETLRLGMKDVRWFVMGDDDTVFVTENLIRVLRKYDHNQYYYIGSLSESHLQNIFFSYNMAYGGGGFAISYPLAKALYKMQDRCIQRYPGLYGSDDRMQACMAELGVPLTKEIGFHQYDVYGNLFGLLASHPVTPLVSLHHLDVVEPIFPNVTRVEALQRFTIPMKLDSAGLMQQSICYDKSKSWTVSISWGFAVQIFRGVFSPREMEMPSRTFLNWYRRADYTAYAFNTRPVSRNPCQKPFVFYFSKAKYNSTMQQIVSQYERYPVPHPDCKWKMANPASLDKVKVYKMPDPHLWDRAPRRNCCRVKKSKEKGTMVIEVGVCGEGEVSET 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2307 505 Gene3D - 84 340 - -
Aed5g2307 505 Pfam Protein of unknown function, DUF604 226 479 IPR006740 -
Aed5g2307 505 PANTHER FRINGE-RELATED 26 504 - -
Aed5g2307 505 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 26 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2307 Aed-Chr5 24816662 24820810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2307 3 504 Glycosyltransferase AT4G23490 67.823 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2307 - - gmx:100818244 919.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1731 11 20895106 20898760 Aed5g2307 5 24816662 24820810 PCT