Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2274 ATGCTGTCTTCTACTTCAGCCACTCGCATCTTATTCCGCACAGCATCTACTACTATAAGATTATCTTCTTCTTCTCTTCAATTCTTCTTCTCCAATCCCAACCGCAGCAGCTTCTTCCGTCCTTTTCTTCACACTTCATTCAAACCACTTCCTTCAACTCCTTTCTCTTTCTCTTTCAGAACAGATCACAATATGGCCGCCGCCACCTCAAGCCCCAAATCAATCCATGATTTCACCGTCAAAGATGCCAAGGGCAATGATATTAATCTCGGTGACTACAAAGGAAAGGTCCTTATCATTGTCAATGTTGCCTCACAATGTGGCTTGACTAATTCAAACTACACTGAGCTGAGTCAGTTGTATGAGAAATACAAACAGAAAGGTCTGGAAATTCTGGCATTCCCATGCAACCAGTTTGGGGCACAGGAGCCAGGATCTAATGAACAGATACAAGAGTTTGTTTGTACTCGATTCAAGGCTGAGTTTCCTGTTTTTGACAAGATTGATGTGAATGGTGACAAGGCTGCTCCACTCTACAAGTATCTAAAATCAAGCAAAGGTGGAATCTTCGGGGATGGTATCAAGTGGAACTTCGCCAAGTTCCTTGTTGATAAAGAAGGGAATGTTGTTGATCGCTATGCACCCACAACTTCTCCTCTGAGCATTGAGGATGCTAAAGGCGAAGATGTGGATCTTGCAACTTACTACAAAGGAAAAGTCTTGATCATTGTTAATGTTGCTTCCAAATGTGGCATGACCAACTCAAATTATGTGGAGTTGAATCAACTATACGATAAGTACAAACACAAAGGTTTCTACTTAATTGCAACACTTCTTATCATTTTCATTAATACAGATGAGTCAGTGAGTTTGATCATTGATGGCTTCAATTTAGGGCTGGAGATTCTGGCATTTCCATGTAATCAATTTGGGGAGGAGGAACCCGGAAGCAATGATCAAATTCACGAGTTTGTTTGCACTCGCTTTAAATCTGAATTTCCCATCTTTCATAAGATTGAAGTGAATGGAGAGAATTCTTCTCCTTTGTATAAGTTCTTAAAGTCAGGAAAGTGGGGAATCTTTGGGGATGATATTCAGTGGAACTTTGCCAAGTTTCTGATTGACAAGGATGGCCAAGTGGTAGATCGCTATTATCCCACCACATCTCCTCTTAGCCTTGAGCGAGACATCCTTAAGCTACTTAGTATTGTCTGA 1215 0.4107 MLSSTSATRILFRTASTTIRLSSSSLQFFFSNPNRSSFFRPFLHTSFKPLPSTPFSFSFRTDHNMAAATSSPKSIHDFTVKDAKGNDINLGDYKGKVLIIVNVASQCGLTNSNYTELSQLYEKYKQKGLEILAFPCNQFGAQEPGSNEQIQEFVCTRFKAEFPVFDKIDVNGDKAAPLYKYLKSSKGGIFGDGIKWNFAKFLVDKEGNVVDRYAPTTSPLSIEDAKGEDVDLATYYKGKVLIIVNVASKCGMTNSNYVELNQLYDKYKHKGFYLIATLLIIFINTDESVSLIIDGFNLGLEILAFPCNQFGEEEPGSNDQIHEFVCTRFKSEFPIFHKIEVNGENSSPLYKFLKSGKWGIFGDDIQWNFAKFLIDKDGQVVDRYYPTTSPLSLERDILKLLSIV 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2274 404 ProSiteProfiles Thioredoxin domain profile. 69 235 IPR013766 -
Aed5g2274 404 Gene3D Glutaredoxin 223 404 - -
Aed5g2274 404 ProSitePatterns Glutathione peroxidases signature 2. 132 139 IPR029760 -
Aed5g2274 404 PANTHER GLUTATHIONE PEROXIDASE 223 276 - -
Aed5g2274 404 PANTHER GLUTATHIONE PEROXIDASE 10 223 - -
Aed5g2274 404 PANTHER GLUTATHIONE PEROXIDASE 298 401 - -
Aed5g2274 404 SUPERFAMILY Thioredoxin-like 74 224 IPR036249 -
Aed5g2274 404 ProSitePatterns Glutathione peroxidases signature 2. 303 310 IPR029760 -
Aed5g2274 404 Pfam Glutathione peroxidase 298 354 IPR000889 GO:0004602|GO:0006979
Aed5g2274 404 Pfam Glutathione peroxidase 75 183 IPR000889 GO:0004602|GO:0006979
Aed5g2274 404 Pfam Glutathione peroxidase 221 276 IPR000889 GO:0004602|GO:0006979
Aed5g2274 404 SUPERFAMILY Thioredoxin-like 221 276 IPR036249 -
Aed5g2274 404 ProSiteProfiles Glutathione peroxidase profile. 236 404 IPR000889 GO:0004602|GO:0006979
Aed5g2274 404 Gene3D Glutaredoxin 65 222 - -
Aed5g2274 404 ProSitePatterns Glutathione peroxidases active site. 238 253 IPR029759 -
Aed5g2274 404 CDD GSH_Peroxidase 74 225 IPR000889 GO:0004602|GO:0006979
Aed5g2274 404 CDD GSH_Peroxidase 220 397 IPR000889 GO:0004602|GO:0006979
Aed5g2274 404 PRINTS Glutathione peroxidase family signature 194 203 IPR000889 GO:0004602|GO:0006979
Aed5g2274 404 PRINTS Glutathione peroxidase family signature 93 110 IPR000889 GO:0004602|GO:0006979
Aed5g2274 404 PRINTS Glutathione peroxidase family signature 129 145 IPR000889 GO:0004602|GO:0006979
Aed5g2274 404 PANTHER GLUTATHIONE PEROXIDASE 223 276 IPR000889 GO:0004602|GO:0006979
Aed5g2274 404 PANTHER GLUTATHIONE PEROXIDASE 298 401 IPR000889 GO:0004602|GO:0006979
Aed5g2274 404 PANTHER GLUTATHIONE PEROXIDASE 10 223 IPR000889 GO:0004602|GO:0006979
Aed5g2274 404 ProSitePatterns Glutathione peroxidases active site. 95 110 IPR029759 -
Aed5g2274 404 ProSiteProfiles Glutathione peroxidase profile. 65 238 IPR000889 GO:0004602|GO:0006979
Aed5g2274 404 SUPERFAMILY Thioredoxin-like 298 401 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2274 Aed-Chr5 24548236 24553547 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2274 K00432 - gmx:100306295 370.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1714 11 20756402 20759977 Aed5g2274 5 24548236 24553547 PCT