Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2255 ATGGAAAATCCTGACGTTGAAAAGTCTGAAGAAACCAATAGACAAATTGGCCGTAACACAAAATCTAATTCTAAACAGCAGAGCCTAGAGAAAGCTAATGAACACCCTGATTGGTTACCTGATGGCTGGAATGTGGAAGTCAGAACCCGTAAAAGTGGTGTACACATGGGATCTCCATATAAGGTGTGTTTCATTGAGCCATTGAAAGGATACAAATTCTTCTCCAAACCGGAGGTATTACGATATCTCGAAACTGTAAAGGACAACAGTTGCACTTCCAAGAAGGGGAAGAAATGTAGTAAAAAAATGCCTTCTCCAAAAGACAACAGTTGCATTTCCAAGAAGGAGAATAACTGCAGTAACATACATCCTCCAAATGGCAACAATTGCACTTTCAAGAAGGAGAAGAAATGCACTAACATGGATTCTCCAAATGACAACAGTTGCACTCCCAAAAAGGAGAAGAATTGCAGTAACATGGATTCTCCAAACAACAACAGTTTGGCTCCCAAGAAGGAGAAGAATCGCGGCAACATGGATTCTCCAAATGACAACAGTTGCACTCCCAAGGAGAAGTATTGCAGTAACATGGATTCTCCAACTGATGTTGTGGTTGAGAAGTCTACTGTGGAGGATTTACCACCTGGATGGGTAAAAGAATTAAAGATTAGGAAGAACAGCAAGGGCATTCGGAAAGATCCGTTTTATATAGATCCAGTGAGTGGATATGTATTCCGTTCTAAGAAGGATGTACTGCGGTATCTTGAATCTGGTGATATACATTCATGTGCATTTAAGCCAAGTAGAAGACAAATCCAAGATGAAGACAATTTAACTCCACCACCTGCTGCTAAGAGACAGAAACTGAAGCAGTCTGCACCCAAACAACAGCTTTCTGCAGCCTCAGAAATACTTGATAAGAGCAACTTAGAATTACCAGATGCTAACAGCTCAAGGAAAGGGCAAAATGCAAATGTGGTATCTGTAACAATGGTTGCTTCTGTTCCTATGGGTGAATCTGTTGTAAAGATGCATTCACTAGAGGATGGAGCTGCAAACTCTTCCGAAGTGAAGAAAACATCTGACCCTGGTAGCTCAGCACTTTTGAATGAATCCCTGAAAGAATCAGAACAAGTACTTTCTGCTGATGATGTGCATGAGAAGGAGCATGTTGTGAATATGATGGGGAATGCTAATGAAAAGAATCGCAGTAGCCTTAGCATATCCAAAAACAGGAAGGAGTTCAATGTACCTCACCGGTCATCACCAAGACTTGCTGGAAGTAAACCTGTCCAGTTGGCCAACAACGTGATCAATGAACAGACTCTCCAGGTTCCAAAAAGAAACTTGAGAAGTAGAAACACTCTAGCTGTTGATAATTCAGAAGACCAAACAGTTTCTAAAGAACAACCACATCAGCGAGAAACGGATAAAATAGAAGACAATAAGCCAGAAACTCAAATTAGCTCAAACAAATCAAGTAAAAAGAAAGAGAACCACCTTCCTCGCCGGGCTTCAAAACGATTAGCTGCAATTGAACATGAGTCAATGAACTCCAAAGCAGAATTGCAGCAAAGTGAGTGTGGGTCAGTTACAGTGCTTGCAGATCAAGCACCAGTAACTGGAAAGTCAGCAAATAAAAGGAAAAAATCAGAACCTCAGCTGGGGAAACGTGAAAATGAAGAAATGGATGATGAGAAATCAGAAACTCGGCTGTCCTTTGCATTTCACTACTCTTGGTCTGACCCAAGCTTGGATTATGCAATCAATACCCTCACTGGTGTGTTACCACCAGCTGAAACTGACATTCCAAAAACTTTGGTTGACAATGCTAGAGGAAAAGGTGCCATTACAGTCCCTGAAATTGATATTCAAAAAACTTTGGTTGACAATGTTACGGGAAGAAGCGCCACTACAGTCTCTGAAACTGATATTCAAAACACTTTAGATGACAATGTTACAGGAAGAAATGCCACTACAGTCCCTGAAACTAATACTCAAAAAACTTTGGTTGACAATGTTATGGGAAGAAGTGCCACTACAGTTCCTGAGACTGATAACCAAAAAACTTTGATTGACAATGTTACAGGAAGAAGTGGGGACAGAAAATCCCAGGTGCGTTCAAATAAAACCAAGAGACAGAAAGAGATCAAAGTACCTATGCGGTTATCAAAGCGACTTGCTGGCCTTGAACCCGAGGTACCACCTGCTGAAAGAGCTCTTGAATATTCCACTAGAAAATCATGCAAAGAAGAACCAACTGCAACTGCTACTTTAACTAATGGAGTGTCTGACCATCACAATGCTGGGGAAGAAACCAAGCTTAGTCGTCAAGCTTCTGACAGTTTGAAAACAGAAGTACTAGGAGAATCATTAAACCAGAGTGAGAAGTCATATGATGCCCAAAATGGTCACAAGGAACAATTGCAGAAAGTTGAAGCTGAAAATATTGGTGATGCGAGATCAGAGCCACAGCTTCCCTTACCGTTTGGGAACTCTTGGTCAGATCCATGCTTTGAATTTGCAATCAAGACTCTCACTGGTGCTTTGCCAGTTGATGCTGGTGACATTATGCCTGCTTTGCCTCCTGGCTTTGATAATCCTCCATATAAGCAATTGCATGGGAGTGTGGTGAAAAGCATTAATCAAGAATCTCACGATTACTCAAGGCAATCCCAGAACAAGAAAGAGCTTAATATGCTTGGCCAACCTGGGTTGAGGGTCAGCTCCACCTCTTATGAAAATGCTCCCAAATTTACAACTAGAGAGTGTTATCTTGATCAAGGCAACATAATAAGGAATTTGAATGAAGAACCTTGTCACACTGGAAACATAACACAACCTGTGCATCATTCTAGGAATATAAACTCACTAACACATGAAGAGCCATTAAAGCAAAATGGACAGGTTGTCAATGGTGGATTTGCTACAACGGGGCAACAACCATTTGAAACTGGAACTGTAAACCATAGTAACTCAGAATTACAGTATTGTGCTCCGTTTATGAATTCTTGGTCAGACCCATGCATAGAATTTGCATTTAAGACTCTTACAGGTGTGATACCAGTAGAGGAAAATTTAACACTTCAAGGATGTTTCCAGGACCCTGTTAACTATCATGAACGAAGAGATGGTGACTCCTCAGTGTTGCCAGATTTAGGATCTTCCAGCTTTTCTCAAAGTGATTTCTCATTTCTCCATGATACAGGGGTTAAGTCTGTGCCGGGGCAGCAGTCATCATTGAGCTCTTCATTCCTACCGCTGGAAAAAACAAGCCTGCAAGGTTTCGCTGGAGTTGATCCTCAAGTACAGATTTCTCAGTGCAACAATAATTTTCAAAGAAGGTAA 3348 0.4113 MENPDVEKSEETNRQIGRNTKSNSKQQSLEKANEHPDWLPDGWNVEVRTRKSGVHMGSPYKVCFIEPLKGYKFFSKPEVLRYLETVKDNSCTSKKGKKCSKKMPSPKDNSCISKKENNCSNIHPPNGNNCTFKKEKKCTNMDSPNDNSCTPKKEKNCSNMDSPNNNSLAPKKEKNRGNMDSPNDNSCTPKEKYCSNMDSPTDVVVEKSTVEDLPPGWVKELKIRKNSKGIRKDPFYIDPVSGYVFRSKKDVLRYLESGDIHSCAFKPSRRQIQDEDNLTPPPAAKRQKLKQSAPKQQLSAASEILDKSNLELPDANSSRKGQNANVVSVTMVASVPMGESVVKMHSLEDGAANSSEVKKTSDPGSSALLNESLKESEQVLSADDVHEKEHVVNMMGNANEKNRSSLSISKNRKEFNVPHRSSPRLAGSKPVQLANNVINEQTLQVPKRNLRSRNTLAVDNSEDQTVSKEQPHQRETDKIEDNKPETQISSNKSSKKKENHLPRRASKRLAAIEHESMNSKAELQQSECGSVTVLADQAPVTGKSANKRKKSEPQLGKRENEEMDDEKSETRLSFAFHYSWSDPSLDYAINTLTGVLPPAETDIPKTLVDNARGKGAITVPEIDIQKTLVDNVTGRSATTVSETDIQNTLDDNVTGRNATTVPETNTQKTLVDNVMGRSATTVPETDNQKTLIDNVTGRSGDRKSQVRSNKTKRQKEIKVPMRLSKRLAGLEPEVPPAERALEYSTRKSCKEEPTATATLTNGVSDHHNAGEETKLSRQASDSLKTEVLGESLNQSEKSYDAQNGHKEQLQKVEAENIGDARSEPQLPLPFGNSWSDPCFEFAIKTLTGALPVDAGDIMPALPPGFDNPPYKQLHGSVVKSINQESHDYSRQSQNKKELNMLGQPGLRVSSTSYENAPKFTTRECYLDQGNIIRNLNEEPCHTGNITQPVHHSRNINSLTHEEPLKQNGQVVNGGFATTGQQPFETGTVNHSNSELQYCAPFMNSWSDPCIEFAFKTLTGVIPVEENLTLQGCFQDPVNYHERRDGDSSVLPDLGSSSFSQSDFSFLHDTGVKSVPGQQSSLSSSFLPLEKTSLQGFAGVDPQVQISQCNNNFQRR 1115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2255 1115 MobiDBLite consensus disorder prediction 543 567 - -
Aed5g2255 1115 MobiDBLite consensus disorder prediction 1 15 - -
Aed5g2255 1115 MobiDBLite consensus disorder prediction 692 716 - -
Aed5g2255 1115 SUPERFAMILY DNA-binding domain 212 264 IPR016177 GO:0003677
Aed5g2255 1115 SUPERFAMILY DNA-binding domain 24 92 IPR016177 GO:0003677
Aed5g2255 1115 MobiDBLite consensus disorder prediction 1 43 - -
Aed5g2255 1115 MobiDBLite consensus disorder prediction 142 172 - -
Aed5g2255 1115 PANTHER OS04G0193200 PROTEIN 2 601 - -
Aed5g2255 1115 MobiDBLite consensus disorder prediction 394 504 - -
Aed5g2255 1115 MobiDBLite consensus disorder prediction 729 785 - -
Aed5g2255 1115 MobiDBLite consensus disorder prediction 465 496 - -
Aed5g2255 1115 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 29 106 IPR001739 GO:0003677
Aed5g2255 1115 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 203 270 IPR001739 GO:0003677
Aed5g2255 1115 MobiDBLite consensus disorder prediction 750 766 - -
Aed5g2255 1115 PANTHER OS04G0193200 PROTEIN 652 1107 - -
Aed5g2255 1115 MobiDBLite consensus disorder prediction 539 567 - -
Aed5g2255 1115 MobiDBLite consensus disorder prediction 140 192 - -
Aed5g2255 1115 MobiDBLite consensus disorder prediction 397 412 - -
Aed5g2255 1115 MobiDBLite consensus disorder prediction 268 299 - -
Aed5g2255 1115 PANTHER OS04G0193200 PROTEIN 2 601 IPR038945 -
Aed5g2255 1115 PANTHER OS04G0193200 PROTEIN 652 1107 IPR038945 -
Aed5g2255 1115 MobiDBLite consensus disorder prediction 428 464 - -
Aed5g2255 1115 Pfam Methyl-CpG binding domain 34 135 IPR001739 GO:0003677
Aed5g2255 1115 Pfam Methyl-CpG binding domain 213 259 IPR001739 GO:0003677
Aed5g2255 1115 CDD MBD 213 262 - -
Aed5g2255 1115 Gene3D - 4 176 - -
Aed5g2255 1115 Gene3D - 177 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2255 Aed-Chr5 24443470 24451011 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2255 - - gmx:100807457 1823.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1701 11 20683297 20686655 Aed5g2255 5 24443470 24451011 PCT