Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2239 ATGCCGCCCATACGGCGTCTCAGGCTGGACTCCGATTCCGATGGAGAAGAACAGCAGGAGCCACAGCCACAGCCACAGACACATTTTGCTGTCGAAATCTCTGACGACGACGCGGACTTCATCGACGTCCTGGACAGCCTCTCTCCACCCTCTGCCGCTTGTCCAGTGACCGACTCCCTCCGCCGCCTCGGACTCTCCCTGAAGAGAGAGTGGCTCACTTCCTGCCTCCGCGAACTCCAAGCCAACGTTGCAGCCTTTGCACACCTCGACGCCGCCGCTAAAGCCAAACGCTGTTTCGAGCAGTTTCTCTTCGCCGACATGAATTACTGTGGCGCTGGCATACTCCCTCCCAACGTTCATGCCATGCACCTTCGCCTTCTTCCCGGTCCCTATGTATTGCAGGTTGATGAAATAATTAATTTGACTTGTCCTCTGCGATCCAGATATATAGAAGCAGCTCCTGGAATCAAGAGGTGTTTGAAGTTATCAATGACTGATGGCATTCAGAGAGTATTTGGAATGGAGTATAGGCCAATCCAAGCTCTTCAAGTTTGTGCCTCTTCTGGTTTCAAGGTTACTATCTCTAATGTACATGTGCGTCGTGGACTTATGATGCTGGTCCCTGAAAACATTGAAATATTGGGTGGATTGGTTCAGGAGATGGATGCTGCTCGAAATCGGCTGGTTAAAGAATTAACGAAGCCACTTAGGGGGAGAAGAACAAGAAACGGAGTGTTTGTTCCTTTAGCGACTAGAGCAACTCTTGCTGCATGGCCTTCAAGTAGTACTGATTCTGTACAGGAAAACAACCAAGGTGCTGGCCCGATCATGGCTGGCACTGCCAACAGCTTACCAACTGAAGATACTTTTCCCATGGGTGTACAAAATGTTGCTTCTAATTCAATACCCCACATGGTATCAAATGCAGAGGCCATGAATATGGATATGCCTAGAGATACCAATCGTGTTTCCCGTGCTAGCCCTATGGTTAACCAGCCCTCTTCTGTCATGTCGGAGGCTGAGGAGATGCACATGGATGCTGCTAATGTCACCAGGGAATATTCTGTTGACAATCAGTCTTCTAACATGTTTTCAACACATAATGACTCTGTTCATATAACAAGAGAAAGTTTTGCGGCTACTGAGTGCCCTCCCGTGGTTGAAAATGTTGATACATACAGGGATAGAACTCCAGTGGCCACAGATAGTTCTCATCCACGAAGAACCTCTTCCACTGTTTTAAACACTAGCAATGACGAGGAGATGGTTGATGCCAGTGACCATCCACTCTTACTGTCTGCAGACCAAGAGGTCCCTTTCACATACATAGCTAGTTTGTCAGCCAAGTGGGCTACAATGAAGGAGGAAGCTCCTTCAGTTCGGGGTAAAATCAAGTGCTTTTTGACTAGTGTAAAAAGATTCCAGTTTAAGGAGAGGACAACATATGAGCTTCAGGCATATGTAGACGATGGTAGCCTTATTTCTGAAATCCTCATTGATCATGATGTTGTACAGAAAGGAATTGGTTTTTCACCTGAGGAGGTAACTGCAGCTATTTCTTCTCCTGACATGAAAATTGTCCAGCAAATGAAGGATACAATGCGTAAATTTCAAGCTTTTTTAGCAAACTTTGAGGGAATAATTCTTGTGGAATTAAATAAAAAATCTTCTCATCCACTTGCCCTAGAGATGAGTCAAGGGTGTCCTGAACCTGATGCACGGTTACTTCTGAGAAGGCTGAAGTCTCTTCAACCTCCACAAGTTCAAAAACCTACAAATCCAATTGAATTATCCCCATAA 1800 0.4611 MPPIRRLRLDSDSDGEEQQEPQPQPQTHFAVEISDDDADFIDVLDSLSPPSAACPVTDSLRRLGLSLKREWLTSCLRELQANVAAFAHLDAAAKAKRCFEQFLFADMNYCGAGILPPNVHAMHLRLLPGPYVLQVDEIINLTCPLRSRYIEAAPGIKRCLKLSMTDGIQRVFGMEYRPIQALQVCASSGFKVTISNVHVRRGLMMLVPENIEILGGLVQEMDAARNRLVKELTKPLRGRRTRNGVFVPLATRATLAAWPSSSTDSVQENNQGAGPIMAGTANSLPTEDTFPMGVQNVASNSIPHMVSNAEAMNMDMPRDTNRVSRASPMVNQPSSVMSEAEEMHMDAANVTREYSVDNQSSNMFSTHNDSVHITRESFAATECPPVVENVDTYRDRTPVATDSSHPRRTSSTVLNTSNDEEMVDASDHPLLLSADQEVPFTYIASLSAKWATMKEEAPSVRGKIKCFLTSVKRFQFKERTTYELQAYVDDGSLISEILIDHDVVQKGIGFSPEEVTAAISSPDMKIVQQMKDTMRKFQAFLANFEGIILVELNKKSSHPLALEMSQGCPEPDARLLLRRLKSLQPPQVQKPTNPIELSP 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2239 599 Pfam RecQ mediated genome instability protein 63 226 IPR013894 -
Aed5g2239 599 PANTHER RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1 52 585 - -
Aed5g2239 599 SMART DUF1767_2 57 150 IPR033472 -
Aed5g2239 599 Gene3D - 106 234 IPR042470 -
Aed5g2239 599 Pfam Recq-mediated genome instability protein 1, C-terminal OB-fold 439 580 IPR032199 GO:0000166
Aed5g2239 599 MobiDBLite consensus disorder prediction 1 27 - -
Aed5g2239 599 PANTHER RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1 RMI1 52 585 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2239 K10990 - gmx:100803734 607.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2239 5 24364945 24367694 Aed5g2239 5 24364945 24367694 ECH