Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2238 ATGTCTTCCGAAACCCTAGAAAACGAGACACCTCAACTGGAAGAAGAAGGTCAAGCAGAAGACAACCACATCGAACATGAAAACAATTCTGAGATGAAAGATGTCGACGACAAAGGCGAAGAAGAAAAGGATCAGGTAGAAGCAGAGAAGAAGAATGAAGAGGAAGAAGATGATGAAGCAGTAGAAGAAGAAGAAGGAGAAGAAGAAGAAGAGAAGGAGGAGGAGCGTGACGAATTGAAGTCAACAAAATCAACGAAAGAAAGCGGTTCCGCTACTCCAGGAAGTGAGAGACCAACTAGGGAGAGGAAAACGGTGGATAGGTACACTGTTTCTTCGCCCGACAAGTTTCCTGGATCTTCTTCTGCCCAACCTCTGTCAATAGAAAAGGGCAACGGTACGCAGCTCAAGGACATTCCTAATGTGGCGTTCAAGTTATCAAAGAGAAAAGCTGATGACAACCTGCGTTCACTTCATAGTATACTGTTTGGGAAAAAAGCAAAGGCAAACAATCTTAAGAAGAATATAGGACTGTTTTCTGGCTATGTGTGGGCTGAAAATGAGGGAAAACAGAGGGCAAAGATAAGGGAGAAGATTGACAAATGTGTGAAAGAAAAATTGGTGGACTTCTGTAATGTGCTTAATATTCCAATAAGCAAGACCAGTATGAAGAAGGAGGAACTGTCTGCAAAGTTGTTGGAATTTTTGGAATCCCCACATGCTACAACTGATGTTCTGCTTGCTGATAAGGAAAAGAAAGGTAAAAAGCGATCCAGAAAGCAAACCCCAAACAAATCTTCTGGGGAAAGATCTGAACCATCTGCCAAGAAGCAAAAGAAAAATTCTCAAGTTGGGAAAAAGCAAAAGCAGTCTTCTGACATTGAGGACAGTGATGCTGCTGAACCTTCAGATGCAAAAGTTGATTCTGAAGATGATGTTTCAAGTAAAAAAAGTGAAAGTGATAATGAGGACAGCATATCAGAGAAAGAGGATCAAACCACACCTGTAAAGAAGACCACTGTTGTAAAGACTGCCAAGAGCAATGAAAAAACTTCTAAAAAATCTACTTCAAAAAAGGCTGTTACTGACAGTACTTCTAAGTCCAAGCAATCTGCTTCCAAGAAACAGAAAACAGTAAAGGAAAGCCAGAACTCTAAAGGGAAGGATGCAAACAACAAACCAGCTGACAAGTCTTCGAAGGCTTTGGTGAAGGATCAAGGCATAGATAAAAGTAGTGAGAAGGCCAAAGCAGAACCTAGTAAGGAGGAGATGCATCGAGTGGCTGTTGATATTTTGAAGGAAGTAGATTTCAACAAAGCAACTTTATCTGATATTCTCAAGCAACTTGGTACTCACTTTGACGTGGATTTAATGCATAGAAAAGCAGAGGTGAAGGATATAATTACAGATGTAATCAATAGCATGTCTGATGACGATGGAGAGGAAGCGGACAATGTGGGGGATGATGATGCAGATGAAGATGATGCCTGA 1488 0.4099 MSSETLENETPQLEEEGQAEDNHIEHENNSEMKDVDDKGEEEKDQVEAEKKNEEEEDDEAVEEEEGEEEEEKEEERDELKSTKSTKESGSATPGSERPTRERKTVDRYTVSSPDKFPGSSSAQPLSIEKGNGTQLKDIPNVAFKLSKRKADDNLRSLHSILFGKKAKANNLKKNIGLFSGYVWAENEGKQRAKIREKIDKCVKEKLVDFCNVLNIPISKTSMKKEELSAKLLEFLESPHATTDVLLADKEKKGKKRSRKQTPNKSSGERSEPSAKKQKKNSQVGKKQKQSSDIEDSDAAEPSDAKVDSEDDVSSKKSESDNEDSISEKEDQTTPVKKTTVVKTAKSNEKTSKKSTSKKAVTDSTSKSKQSASKKQKTVKESQNSKGKDANNKPADKSSKALVKDQGIDKSSEKAKAEPSKEEMHRVAVDILKEVDFNKATLSDILKQLGTHFDVDLMHRKAEVKDIITDVINSMSDDDGEEADNVGDDDADEDDA 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2238 495 Coils Coil 36 85 - -
Aed5g2238 495 MobiDBLite consensus disorder prediction 373 423 - -
Aed5g2238 495 MobiDBLite consensus disorder prediction 342 356 - -
Aed5g2238 495 MobiDBLite consensus disorder prediction 474 495 - -
Aed5g2238 495 MobiDBLite consensus disorder prediction 1 133 - -
Aed5g2238 495 Pfam DEK C terminal domain 418 470 IPR014876 -
Aed5g2238 495 MobiDBLite consensus disorder prediction 16 50 - -
Aed5g2238 495 MobiDBLite consensus disorder prediction 245 423 - -
Aed5g2238 495 MobiDBLite consensus disorder prediction 113 130 - -
Aed5g2238 495 MobiDBLite consensus disorder prediction 288 335 - -
Aed5g2238 495 MobiDBLite consensus disorder prediction 472 495 - -
Aed5g2238 495 Gene3D - 409 473 - -
Aed5g2238 495 SUPERFAMILY DEK C-terminal domain 412 472 - -
Aed5g2238 495 MobiDBLite consensus disorder prediction 51 75 - -
Aed5g2238 495 PANTHER OS01G0924900 PROTEIN 19 345 - -
Aed5g2238 495 PANTHER OS01G0924900 PROTEIN 331 494 - -
Aed5g2238 495 MobiDBLite consensus disorder prediction 261 278 - -
Aed5g2238 495 PANTHER DEK PROTEIN 19 345 IPR044198 GO:0003677|GO:0006325
Aed5g2238 495 PANTHER DEK PROTEIN 331 494 IPR044198 GO:0003677|GO:0006325
Aed5g2238 495 MobiDBLite consensus disorder prediction 357 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2238 Aed-Chr5 24359346 24364297 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2238 K17046 - gmx:100785644 602.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2238 5 24359346 24364297 Aed5g2238 5 24359346 24364297 ECH