Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2224 ATGGCAGAGATTCAGCCTCCGGAGGGCCAAATAAACGGTGGCGCCGGAACCCTAATTCTTCACTCCTCGGAACCCTCCATCGGATCCAAGCGCCAGCGGCGGCCGAGCGTTCGATTGGGCGACATCGGCGGCGACCAGCCCTACGATTCCCACGCGCGCCGCAACGCCAAGCCGTGGAAACTCGCCTTCGACAACCACCACCACCACCACCGCAACAAGGACAAGGACCCAGGTAAACCCTCCAAGACTCGTCCTTTAACGAACCTGAGCGAGTTCAACGAAACCCTAGAACCCTCCAACGACCGAGAACCGGGGAACATCGACACCGTCGCAATTGGCAGCTGGAAGCTCAAGGAGTCCAAGAAGAGAGGCTCCGTGGCCACCAAAAGGGTCAGATCGAATTGGGTTTCGCGTATCGACGATGGCAGCGGCGACAACAACGGTGGCGGCGAGGGAGAGGGGGAGGGGGAGGGAGAGAAGTATAATAACGGGGACGAAGATGGGGATGACGATGATGGGTATCGGGAATTTGAGGTGGAGAATTCGGAGAGCCCTTTGAAGGAGCAGAGCCCTATTCATAGTATGGAGAATTTGGGGGTTGATGGGCATAGGAGGGTTTTTAAGAGTAGGGAAAGGGAGCAGCAGCATGATGCAGTTGAGCTATCTGCACCGTCTGATACTGATGTTAGGGTTTGGAAGAGTGTGGATAGGAACAATGAGAATGGTGGTGGTGGTGGTGGAAGGGTTAGGGGTGGTGAAGATGGGGTTAGGGTTTGGCTTAATGGGTTGGGATTAGGGCGTTATGCGCCTGTGTTTGAAGTGCATGAGGTGGATGATGAGGTTTTGCCTATGTTGACTTTAGAGGATCTCAAGGATATGGGGATTAGTGCTGTTGGGTCAAGGAGAAAAATGTACACTGCAATTCAGAAGCTTGGAAAGGGCTTCTCCTGA 951 0.5426 MAEIQPPEGQINGGAGTLILHSSEPSIGSKRQRRPSVRLGDIGGDQPYDSHARRNAKPWKLAFDNHHHHHRNKDKDPGKPSKTRPLTNLSEFNETLEPSNDREPGNIDTVAIGSWKLKESKKRGSVATKRVRSNWVSRIDDGSGDNNGGGEGEGEGEGEKYNNGDEDGDDDDGYREFEVENSESPLKEQSPIHSMENLGVDGHRRVFKSREREQQHDAVELSAPSDTDVRVWKSVDRNNENGGGGGGRVRGGEDGVRVWLNGLGLGRYAPVFEVHEVDDEVLPMLTLEDLKDMGISAVGSRRKMYTAIQKLGKGFS 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2224 316 ProSiteProfiles SAM domain profile. 251 314 IPR001660 GO:0005515
Aed5g2224 316 MobiDBLite consensus disorder prediction 162 177 - -
Aed5g2224 316 Gene3D - 251 311 IPR013761 -
Aed5g2224 316 SUPERFAMILY SAM/Pointed domain 254 311 IPR013761 -
Aed5g2224 316 PANTHER SCP160 24 316 - -
Aed5g2224 316 CDD SAM_superfamily 256 310 - -
Aed5g2224 316 MobiDBLite consensus disorder prediction 16 30 - -
Aed5g2224 316 PANTHER - 24 316 - -
Aed5g2224 316 SMART SAM_4 248 314 IPR001660 GO:0005515
Aed5g2224 316 MobiDBLite consensus disorder prediction 1 196 - -
Aed5g2224 316 MobiDBLite consensus disorder prediction 83 102 - -
Aed5g2224 316 Pfam SAM domain (Sterile alpha motif) 255 311 IPR001660 GO:0005515
Aed5g2224 316 MobiDBLite consensus disorder prediction 47 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2224 Aed-Chr5 24270507 24271457 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2224 - - gmx:100802147 521.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2224 5 24270507 24271457 Aed5g2224 5 24270507 24271457 ECH