Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2212 ATGGAACTGGGTTGGGCTAGTAGTTGCTGGCCCGGCCCATTTAAACATATTGGTAGACTACTGTATCTCTTTCCTTCCTTGCATTGCATCCTCAGTTCTATTCATTTTTGGAGTCCCTTTGTCATAGGCAGCGCACGTAACATTCGACTCGATGAGGAAGGAGAGCCAAGCGTCCGCTATGGAAATCGACGCTGCAAAATCGACGAATTCAGATCAGATGGTCCCCAAATTCTCCATGAATGGTTTGTCTGCTCCTGCGCTTTTCAATGCTGTTCCATTCATGTTCCTTCCACCACGGAAATGGCAAATACTGCATTTGATAGTGAAACTTTGGTGATTGGTGTAATTAATATTTTTATTTTAAAAAACTTACCAGTACTGCAGCTGTTGAAATCCGCGCAAATGCAGCATGGCTTGCGCCACGGAGATTACACTCGCTATAGGAGGTATTGCACGGCTCGTTTGAGGAGGTTATATAAATCGTTGAAGTTTACCCATGGTCGTGGCAAATATGCAAAAAGGGCCATAACTGAGTCTACTGTCACTGAAGTAAGGTTTCTTCATCTAACTCTCTATACAGCAGAGAGAGCTTGGAGTCATGCCATGGAGAAAAGGCAGCTTCCAAATGGCCCAAATGCACGTCAACGTATATATTTGATTGGTAGGTTGCGGAAAGCAGTAAAATGGGCTACATTGTTTTCACAATTGTGTGCAATCAAGGCAGATTCTAGAACATCTTTGGAAGCTGAGGCTTATGAATCCTATATGAAAGGGAGTTTGTTGTTTGAGCAAGATCAGAATTGGGACGTGGCTTTGAAGAACTTCAAAAGTGCTAGGGCTGTATATGAGGAATTAGGGAAATATGGAGATCTGGATAACCAAGTTTTGTGTCGTGAGCGAGTTGAGGAACTAGAACCTAGTATCCGATACTGCCTTCACAAAATTGGTCAGTCAAATCTACAGGCCTCTGAACTTTTACAAATTGGTGATGTGGAAGGTCCTGCATTAGACCTTTTTAAAGCTAAATTAGAGGCTGTCATGCACGAGGCAAGATCTCAGCAAGCTGCTTCCATGACAGAATTCCTTTGGCTTGGCCACAGATTTCCAATTTCAAATGCCAAAACAAGGGTTTCCATCCTGAAAGCTCAGGAGCTGGAGAAAGATATACATGGTCCCTTGGCAGACTCAATTCCAGCAGACAAAAGACTTGTCATTTTTGACAAAATCTTTTCTGCATATCATGAAGCCAGAGGCTATATTCGGGCTGATTTGGCCACTACAGGAAGTACAGAAAGCGTGAAAGATGATCTGAATGGTCTTGATAAGGCTGTCAGTGCTGTCCTAGGAGAAAGAACCATTGAGCGCAACCTCTTGTTGGTTAAGGTTGCAAAAAGCAAACTTGCAAAGCGTCATGATGATAAAAATGAAAAAGTCACCAAACCTGAAGAGCTTGTTCGCTTATATGATCTCTTGCTACAGAATACGGCTGATCTATCTGATTTAGTCAGTTCTGGAAGGGATAAAAAGCCAGAAGAAGTTAGCTTTGCTGAAGTGTGTTCATGCAAAAGTTTGGCTTTTCGATCTCAAAGGTGCTTTTATGTTGCAAAGTCATACAGTGTGGCTGGAAAGAGGGCTGAAGCATATGCATTGTACTGTCGTGCTCGCAATTTGGCAGATGACGCCTTAAAAAAGTTTCAAATGTTGGATGGTGATAATAAGACTATGATGAAAGAGTTGGAGGACTTGTGCAATGAGTGCCGATCTAACAGTTGTATAGAACATGCATTGGGGATCATGGAGGAGAAGAAGACTCAAGAGAATCTATCTGAAAGGGTCTCCAATATATCATTGACCGGAACTGAGCGGTTGGAGAAGTTCCTTCTTGAGAAACTCGATGTTTACGAGTCTGCTGTGGGTGATTCAAATGTGAAGTGTACACCACGCATTGCAGGATTCCCTCCAGCTTTCCAGGCAATTTCCCGTAATCCTATTGTGCTGGATCTGGCTTATAACATGATTGAATTCCCACCTATTGAAAATAGGTTGAAGAAGGATAGAAAAGCCAAGGGTGGCTTTATTAGTAGAATATTTGGGTGA 2097 0.4254 MELGWASSCWPGPFKHIGRLLYLFPSLHCILSSIHFWSPFVIGSARNIRLDEEGEPSVRYGNRRCKIDEFRSDGPQILHEWFVCSCAFQCCSIHVPSTTEMANTAFDSETLVIGVINIFILKNLPVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKSLKFTHGRGKYAKRAITESTVTEVRFLHLTLYTAERAWSHAMEKRQLPNGPNARQRIYLIGRLRKAVKWATLFSQLCAIKADSRTSLEAEAYESYMKGSLLFEQDQNWDVALKNFKSARAVYEELGKYGDLDNQVLCRERVEELEPSIRYCLHKIGQSNLQASELLQIGDVEGPALDLFKAKLEAVMHEARSQQAASMTEFLWLGHRFPISNAKTRVSILKAQELEKDIHGPLADSIPADKRLVIFDKIFSAYHEARGYIRADLATTGSTESVKDDLNGLDKAVSAVLGERTIERNLLLVKVAKSKLAKRHDDKNEKVTKPEELVRLYDLLLQNTADLSDLVSSGRDKKPEEVSFAEVCSCKSLAFRSQRCFYVAKSYSVAGKRAEAYALYCRARNLADDALKKFQMLDGDNKTMMKELEDLCNECRSNSCIEHALGIMEEKKTQENLSERVSNISLTGTERLEKFLLEKLDVYESAVGDSNVKCTPRIAGFPPAFQAISRNPIVLDLAYNMIEFPPIENRLKKDRKAKGGFISRIFG 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2212 698 PANTHER SIGNAL RECOGNITION PARTICLE 68 KDA PROTEIN 123 696 IPR026258 GO:0005047|GO:0005786|GO:0006614|GO:0008312|GO:0030942
Aed5g2212 698 Gene3D - 122 317 IPR038253 GO:0003723
Aed5g2212 698 CDD SRP68-RBD 125 313 IPR034652 GO:0003723
Aed5g2212 698 Pfam RNA-binding signal recognition particle 68 139 673 IPR026258 GO:0005047|GO:0005786|GO:0006614|GO:0008312|GO:0030942
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2212 K03107 - gmx:100816486 1092.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2212 5 24161015 24166891 Aed5g2212 5 24161015 24166891 ECH