Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2208 ATGGGACTCAAACCGAACCAAAACAAAAGCAAACCAACGGAAACGGAACACGAGCAAAACGACGTCGTCAATGTCAGTGAAGAACACGAACAAACATTGGTGGCTCTGATCGAACACCGTTCCCGTGAAGTAAAAAATCTCCGCTACTACATTTCTTATTACACCGTCCAGCTTGAGGATGCGGAGAAGAGGTTGCGAGAATCTAAATCGAAATTGACTCTCATCCGAGGTCAAACTAGTGCTGCAAGTTCATCTGATATTGTTGAAACTAACCATGTTGTGAAGATTGAAGAACATGGATCAAAAAACGGTTCCTTTTCCATTGAAAAGAGTACTACTGGTGTTTCTTCCAAAAACCACCACCAGTACTACTCGCACGTTACTGTGAATTCAAAATTTTCGCATCCCATACCGGTGTTGCCACCTTCTTCTCCTTCTACTTTTGCTGTTACAACCGCAAAGTCTCACGCTGAAATTAAGGATGACAGAGGGGCCAAAAGGAAGTTTTGTAATGGACGGAAAGAACACGAGGAATTGGTTCCTTTAATATGCATGAGTTCTTCACCACGCACTGTGGTTTCTCAAGAAATAAGCACTCACTTGCCAAGTCAGCACAAAAGAAGAGTTCGATGTATTACTCTTTGTCCTGTGAATACTCAGCGATTTGTGACCAGTGCTTTGGACGGAGTGGTCAACTTGTGGGATATTCATTCTTCTGGATCAGGAGCTTATCTGCGTAAAACTATTGATTGTGCATCCCAAAAGCAGAGGAGATGGCCGGAAGATATGGCTTGGCACCCTGATGGAAACAGTGTATTTTCAGTATATAATGCTGATAGTCAAGACTCTCAGATATCAGTTACGGAATTCAGTAAGGTGCAAGGGGTAGAGGTAAGATGTGATTTTTGTGGCAAATATGCTGGACTGAAAATAGCAGTTTAG 942 0.4257 MGLKPNQNKSKPTETEHEQNDVVNVSEEHEQTLVALIEHRSREVKNLRYYISYYTVQLEDAEKRLRESKSKLTLIRGQTSAASSSDIVETNHVVKIEEHGSKNGSFSIEKSTTGVSSKNHHQYYSHVTVNSKFSHPIPVLPPSSPSTFAVTTAKSHAEIKDDRGAKRKFCNGRKEHEELVPLICMSSSPRTVVSQEISTHLPSQHKRRVRCITLCPVNTQRFVTSALDGVVNLWDIHSSGSGAYLRKTIDCASQKQRRWPEDMAWHPDGNSVFSVYNADSQDSQISVTEFSKVQGVEVRCDFCGKYAGLKIAV 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2208 313 ProSiteProfiles Trp-Asp (WD) repeats profile. 202 238 IPR001680 GO:0005515
Aed5g2208 313 SUPERFAMILY WD40 repeat-like 176 287 IPR036322 GO:0005515
Aed5g2208 313 Gene3D - 172 305 IPR015943 GO:0005515
Aed5g2208 313 SMART WD40_4 194 235 IPR001680 GO:0005515
Aed5g2208 313 Coils Coil 58 78 - -
Aed5g2208 313 MobiDBLite consensus disorder prediction 1 23 - -
Aed5g2208 313 PANTHER TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN 10 297 - -
Aed5g2208 313 PANTHER TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN 10 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2208 Aed-Chr5 24139414 24141459 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2208 - - ccaj:109813667 299.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2208 5 24139414 24141459 Aed5g2208 5 24139414 24141459 ECH
Aed5g2208 5 24139414 24141459 Aed10g0762 10 6240085 6246664 PCT