Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2182 ATGAATTCTCCAATTCATGCCCCTTCACCTCCTTCCTCTTCTTCTTGCTCCTATAACCGTCCTCCTCCATGCCTGGCTCATGTTTCTCGTAATTTCAAGTCTCCTCTGCTGATGCCACAGGCAATCCGAACCTCTCAGAAGATGTATCGCTGCTCTGGAGGCCATATGGAGGCTTCTTCTAACATTAATCCCTTGAAAAATTATGTAGTGGGCAGAAGTACTTCAGGATGGTTTGAAAAACAACCCTTGGTTTCTGAGCAATTACTCAACAGGCACTTGTTGCCAGTGGAAGCTTTAGTAACTCCCACAGTTCAAGATTTTTCTGATACACCTCTTATTGGTGATGATAAGATTGGAGTGTTATTGTTGAACCTCGGAGGTCCAGAGACTTTAGAAGATGTGCAGCCTTTTTTGTTTAACCTTTTTGCTGACCCAGATATTATACGACTGCCAAGGTTATTTAGCTTTCTTCAAAAGCCATTGGCTCAATTTCTCCAAAGAGCAAAGAAGGCTATGCTTCAATTGGTGGTGGATCTCCTCTTAGACGCTGAGGAGTTGAAGAAATCTCTTTGGGCAAAGAATGTCCCAGCCAAAGTTTATGTTGGCATGCGTTACTGGCATCCATTCACTGAAGAGGCTATTGAGCAGATTAAAAGGGATGGAATTACAAAGCTTGTTGTGCTTCCACTTTATCCACAATTTTCAATTTCAACCAGTGGTTCAAGTCTTCGTCTCTTGGAGAATATATTCAGAGAGGATGAGTATCTAGTAAACATGCAGCACACGGTAATTCCTTCATGGTACCAGCGTGAAGGATACATTAAGGCCATGGCAAATTTAATTGAAAAGGAGCTAAAAGGTTTTGACTGCCCCAAGAAGGTCATGATATTCTTTAGTGCACATGGGGTGCCTCTTGCTTATGTAGAAGAGGCCGGTGATCCATACAAGGCAGAGATGGAGGAATGTGTTGATTTGATCATGGAAGAGCTTGAAAAGAGAAAGATAACTAATGCATACACCCTTGCTTATCAGAGTAGAGTTGGACCCGTGGAATGGTTAAAACCTTATACAGATGAGACAATAGTTGAACTTGGGAAAAGGGGAGTAAAAAGTCTGCTGGCTGTACCAATTAGCTTTGTCAGCGAGCATATTGAAACTCTAGAAGAAATTGACGTTGAGTACAAAGAATTGGCTCTAAGCTCTGGTATAGAAATATGGGGTCGTGTTCCTGCTCTAGGAACTGAACCCACCTTCATTTCAGATTTGGCAGATGCCGTGATTGAGAGTCTCCCTTATGTTGGTGCAATGGCGGTTTCAAACCTTGAAGCTCGACAGTCTTTGGTTCCACTGGGCAGTGTAGAAGAGTTATTGGCAGCATATGACTCGCAACGTAGGGAGTTGCCACCACCAGTAATGGTGTGGGAATGGGGATTTACCAGAAGTGCTGAAACTTGGAATGGAAGAGCAGCTATGCTTGCTGTGCTTCTTCTGTTGTTTTTAGAAGTCACCACTGGTGAGGGATTTCTGCACCAGTGGGGAGTGTTGCCCTTGTTTAGGTGA 1560 0.4346 MNSPIHAPSPPSSSSCSYNRPPPCLAHVSRNFKSPLLMPQAIRTSQKMYRCSGGHMEASSNINPLKNYVVGRSTSGWFEKQPLVSEQLLNRHLLPVEALVTPTVQDFSDTPLIGDDKIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRLFSFLQKPLAQFLQRAKKAMLQLVVDLLLDAEELKKSLWAKNVPAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLENIFREDEYLVNMQHTVIPSWYQREGYIKAMANLIEKELKGFDCPKKVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIVELGKRGVKSLLAVPISFVSEHIETLEEIDVEYKELALSSGIEIWGRVPALGTEPTFISDLADAVIESLPYVGAMAVSNLEARQSLVPLGSVEELLAAYDSQRRELPPPVMVWEWGFTRSAETWNGRAAMLAVLLLLFLEVTTGEGFLHQWGVLPLFR 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2182 519 Pfam Ferrochelatase 117 429 IPR001015 GO:0004325|GO:0006783
Aed5g2182 519 SUPERFAMILY Chelatase 116 436 - -
Aed5g2182 519 TIGRFAM hemH: ferrochelatase 116 430 IPR001015 GO:0004325|GO:0006783
Aed5g2182 519 PANTHER FERROCHELATASE-1, CHLOROPLASTIC/MITOCHONDRIAL 66 440 - -
Aed5g2182 519 Hamap Coproporphyrin III ferrochelatase [cpfC]. 116 430 IPR001015 GO:0004325|GO:0006783
Aed5g2182 519 CDD Ferrochelatase_N 118 269 IPR033659 -
Aed5g2182 519 ProSitePatterns Ferrochelatase signature. 296 317 IPR019772 GO:0004325|GO:0006783
Aed5g2182 519 Gene3D - 117 429 - -
Aed5g2182 519 CDD Ferrochelatase_C 275 413 IPR033644 -
Aed5g2182 519 PANTHER FERROCHELATASE 66 440 IPR001015 GO:0004325|GO:0006783
Aed5g2182 519 SUPERFAMILY Chlorophyll a-b binding protein 474 514 - -
Aed5g2182 519 Gene3D - 268 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2182 Aed-Chr5 23944066 23951648 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2182 K01772 - gmx:100803481 916.376
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2182 5 23944066 23951648 Aed10g0723 10 5933150 5939165 PCT