Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2174 ATGGGGGGTCTTTGTTCAAAGTCTGTGAAAGGTGACAAGGTGTTTGCCAAAGCCGATGGACATTCTGATAACCATAAATCTGCTGGTAAGAATCACAAGAAGTCCACCACCATGCCCAGTGATTTGACAAGTGCAGAGGATCATGAAGTGGACAAGAAAAAACAAGAGGGTGCTGCTGTTTCTGCTGCTGCCCCTGCTGCAGGGACTCGTTCTGATGATTTCTATGATGGAATCCCACGGTTTAACGATTCTTTTCCCCACAAGTCTAGGTCAGTAAGATCAAGGCAAGCTGTTGCAAAGGTCTCAGAGGTGAGTTTACGCCTGGGCAGAGCTGGTATTGACGTTTTGGACACTCTTGGGAGCAGCATGGCAAATTTAGGTGCTGGTGGGTTTGTATCCGGAGCTGTGACAAAGGGGAATGAAATTGGTATTTTAGCATTTGAGGTTGCAAACACTATTGTCAAGGGTTTTAGTCTTAAGGAATCTCTTTCGACAAAAACTATTAAGCATTTAAAAGAAGAGGTGCTTCCATTAGAGGCTGTGCAAGATTTAGTATCAAAGGATATGGATGAACTTCTAAGGATTGTTGCTGCAGACAAAAGGGATGAGTTGAAAGTCTTTTCTGATGAGGTAATTCGTTTTGGAAATCGTTCAAAGGATCCTCAGTGGCACAACTTGGACCGATACTTTGAGAAAATTAGCAGAGAACATAATTCTCAGAGACAATCCAAGGAGGAGGCAGAATTACTAATGCAACAATTGATGACTTTGGTTCAGTTTACAGCTGAATTATATCATGAGTTACATGCTTTGGATAGATTTGCACAAGATTACCAGCATAAGCGCGAAGAGGATGATCATTCAGGTGCAGCTCAAAGTGGTGATGGCCTTTCAATCTTGAGGGCAGAACTTAAAACTCAAAAGAAGCAAGTTAAACATTTGAAAAAAAAGTCACTCTGGTCCAGAAGTTTGGAGGAGATTATGGAGAAGCTTGTAGAGATAGTCCAGTTTTTGCATTTGGAGATAAACAATGCCTTTGGCCCTGCAGATGACAATAAACCATTAATTCGAACCATCAGCAATCGCCAAAGATTGGGTCCTGCAGGCCTTTCTTTGCATTATGCTAATATAGTGCTCCAAATTGATACTCTTGTTGCCAGATCCAGTTCTATGCCCACAAACACAAGGGATGCTTTGTATCAGAGCTTGCCTCCTAATATAAAATTAGCCTTGCGTTCCAAATTACGAAGCTTTCATGTTGTAAAAGAGCTCACCATATCAGATATTAAACAAGAGATGGAGAAAACATTGCATTGGCTGGTTCCGATTGCTACAAACACAGCCAAAGCACATCATGGTTTTGGTTGGGTAGGGGAGTGGGCAAGCACTGGTTCTGAGCTGAACAAGAAGACCATGAAGGCTGATGTGATGCGGATTGAAACGCTTCACCATGCTGATAAAGATAAAGTAGACAATTATATTCTCGAACTTCTCCTATGGCTTCACCACTTGGCCGTCAAAAGTAAAGCTGGCATTGATACCGGAGAAATGAAGTCTACCTTAAACTCGCATGTTGGCACTGCCCTTCAAACTACAAATCAACAATCTACAAAAGCCTTACTTCCATTGTTAACAACCGACGACCAGAAAATGCTGCAAGATGTTAGTAATAAAAGTCATATAAGAAGGATCAGTAAAAGCTTGGACTTTGACAGTGTGAAGACAGATAATGACAGACTTACTAAGAGTAGCAGTTATTCTTATTCATCAACAAGTAGAAGCAAGGAATTATCTTTCAATAGAATTTTGTCTAAGCTTCCTATTATTGATTTTGGTATTGACAAAAGGAGAGCATTGGATGTGATTGACAGATTAGATGTGGTGGCCAGATAA 1893 0.4099 MGGLCSKSVKGDKVFAKADGHSDNHKSAGKNHKKSTTMPSDLTSAEDHEVDKKKQEGAAVSAAAPAAGTRSDDFYDGIPRFNDSFPHKSRSVRSRQAVAKVSEVSLRLGRAGIDVLDTLGSSMANLGAGGFVSGAVTKGNEIGILAFEVANTIVKGFSLKESLSTKTIKHLKEEVLPLEAVQDLVSKDMDELLRIVAADKRDELKVFSDEVIRFGNRSKDPQWHNLDRYFEKISREHNSQRQSKEEAELLMQQLMTLVQFTAELYHELHALDRFAQDYQHKREEDDHSGAAQSGDGLSILRAELKTQKKQVKHLKKKSLWSRSLEEIMEKLVEIVQFLHLEINNAFGPADDNKPLIRTISNRQRLGPAGLSLHYANIVLQIDTLVARSSSMPTNTRDALYQSLPPNIKLALRSKLRSFHVVKELTISDIKQEMEKTLHWLVPIATNTAKAHHGFGWVGEWASTGSELNKKTMKADVMRIETLHHADKDKVDNYILELLLWLHHLAVKSKAGIDTGEMKSTLNSHVGTALQTTNQQSTKALLPLLTTDDQKMLQDVSNKSHIRRISKSLDFDSVKTDNDRLTKSSSYSYSSTSRSKELSFNRILSKLPIIDFGIDKRRALDVIDRLDVVAR 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2174 630 Pfam Domain of unknown function (DUF3475) 144 200 IPR021864 GO:0045927
Aed5g2174 630 MobiDBLite consensus disorder prediction 14 30 - -
Aed5g2174 630 Coils Coil 297 317 - -
Aed5g2174 630 PANTHER DUF668 FAMILY PROTEIN 2 628 - -
Aed5g2174 630 PANTHER OS01G0873900 PROTEIN 2 628 IPR045021 GO:0045927
Aed5g2174 630 MobiDBLite consensus disorder prediction 14 65 - -
Aed5g2174 630 Pfam Protein of unknown function (DUF668) 364 449 IPR007700 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2174 Aed-Chr5 23885941 23892536 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2174 - - gmx:100804075 1087.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2174 5 23885941 23892536 Aed10g0717 10 5838592 5851999 PCT