Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2120 ATGTCAGAAACATCTCATGACTTTTGCAACCACTCTGAGTCGTTTAAGAAGCTCGTGGAGATGGCTTTGCCCTGTAATGAATCAGTGGAGGAAAAGCTGTGTTGGTTGCGGTCACAGATCATTGGTAATGATGCAGAGTTCGATTCCCCATTTGGAAAACGAAAAGTTGTCTATGCTGATCACACTGCTTCAGGCCGCAGCCTTCACTACAACGAGAATTTCATCATCAAACACCTTCTTCCTTTCTATGGTAACACGCACACATGCGACAGTTACGTGGGAAGCAGGACAACAAAAATGGTACACGAAGCAAGTGAGTACATTAAAAAGTGTTTAGGTGGTGGGGGCGAAGATGCACTTATATTATGTGGCTCTGGCACAACTGCAGCTATCAAGAGGCTGCAAGAAGTGATGGGAATCGCTGTGCCCTCTATTTTGAGGGAAAGGGTTTTGAATAGTCTCAACACAGAAGAAAGATGGGTGGTTTTTGTTGGTCCTCATGAGCACCATTCAAACCTTCTTTCTTGGAGGCAAAGCTTGGCTGAGGTGGTAGAGATTGGTCTTGATCATAAAGGGTTGCTTGACATGGATGCCCTAAAGCTTCAACTTGAGGACTACAAAGATACCAACCGACCCATGTTGGGATCTTTCTCAGCTTGTAGCAATGTCACGGGAATCTACTTAGATACACGTATTGACGTGAGGTCAGTGGAGAGTGATGGGTATGATGCAGTGTTTCTGAGTCCACATAAGTTTCTTGGTGGTCCTGACTCTCCTGGGGTGCTCCTCATGAACAAGGCTCTCTACCTGCTACGATCTTCACCACCGACCACTTGTGGGGGTGGAACCGTCACTTATGTCAATGGCTTCAATGAACAGGATACATTGTACATGGAGAACATAGAGGAAAGGGAAAGTGGGGGCACGCCTCCAATAATCCAGACAGTGAGAGCAGCATTGGCATTTTGGGTGAAGGAATATATAAGCTATGAAGAGATTGAAAAACAGGAACAACTTTACATTAACAAGGCACTTGAGAGGCTTGGCTCAAACCCCAACATTGAGGTTCTAGGAAACTTAAAGGCCAAGAGACAAGCTATATTGTCATTTCAGATACACTCTACCACCAATTCTTCCTCAGCTGGTGATCAGTGGAGTGATTTGTGGGCTGAAACTGGGAACCAAAGAGGTAAACCACTTCATGGCCCTTTTGTTGCAACACTACTCAATGACCTATTTGGCATCCAAGCTCGAGGTGGGTGTGCTTGTGCTGGACCTTATGGCCACCAATTGCTTCACATCAACAAGTCTCAATCACTTGCCATTAGATCAGCAGTTCAAGAGGGCTACATTGGAGTAAAGCCAGGGTGGACACGAGTTAGTTTTCCATACTACATGAGTGAAGAGGATTTTGAGTACATTCTGAAAGCCATAGAGTTTTTAGCTGTGTATGGCCAGCGATTCTTTCCTTTATATAGCTTCAATTTGATAAATGGGAGCTGGAGATTGAAGACAGAGAAATTTGAGGCACTGACCAAGGAAAGAAATTGCAACTTTGAGGCAGCTAAATGTGTTGCTAGTAGCCTCCCCAAATTCCCTTCTCAGGGTATAATACTCCACGAGGACCTGGATCCGAATATCTTGTGTTTTAGAGTTTAA 1659 0.4467 MSETSHDFCNHSESFKKLVEMALPCNESVEEKLCWLRSQIIGNDAEFDSPFGKRKVVYADHTASGRSLHYNENFIIKHLLPFYGNTHTCDSYVGSRTTKMVHEASEYIKKCLGGGGEDALILCGSGTTAAIKRLQEVMGIAVPSILRERVLNSLNTEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDHKGLLDMDALKLQLEDYKDTNRPMLGSFSACSNVTGIYLDTRIDVRSVESDGYDAVFLSPHKFLGGPDSPGVLLMNKALYLLRSSPPTTCGGGTVTYVNGFNEQDTLYMENIEERESGGTPPIIQTVRAALAFWVKEYISYEEIEKQEQLYINKALERLGSNPNIEVLGNLKAKRQAILSFQIHSTTNSSSAGDQWSDLWAETGNQRGKPLHGPFVATLLNDLFGIQARGGCACAGPYGHQLLHINKSQSLAIRSAVQEGYIGVKPGWTRVSFPYYMSEEDFEYILKAIEFLAVYGQRFFPLYSFNLINGSWRLKTEKFEALTKERNCNFEAAKCVASSLPKFPSQGIILHEDLDPNILCFRV 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2120 552 Gene3D Aspartate Aminotransferase, domain 1 302 484 IPR015422 GO:0003824
Aed5g2120 552 PANTHER CYSTEINE DESULFURASE 231 520 - -
Aed5g2120 552 Gene3D - 73 237 IPR015421 GO:0003824
Aed5g2120 552 PANTHER - 6 231 - -
Aed5g2120 552 Pfam Aminotransferase class-V 239 472 IPR000192 -
Aed5g2120 552 Pfam Aminotransferase class-V 76 228 IPR000192 -
Aed5g2120 552 PANTHER - 231 520 - -
Aed5g2120 552 SUPERFAMILY PLP-dependent transferases 50 479 IPR015424 -
Aed5g2120 552 PANTHER CYSTEINE DESULFURASE 6 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2120 Aed-Chr5 23497200 23499550 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2120 - - gmx:100777453 1005.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2120 5 23497200 23499550 Aed5g2120 5 23497200 23499550 ECH