Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2099 ATGGCATCGGATGCTGCAAAGATGGAACAAATCATTACCGAGTTCTTCGCGAAGAGCCTTCACATAATACTTGAATCAAGGGCACTCTATGTCTCCTCGCGCAATTCCTTTGGCGATCAAGCTGTTTTGTCTCCGTGCTCGTCGTCTTCATCTTCATCAAGTGTGCGGCCGAGGGATAAGTGGTTCAATTTGGCGCTCCGGGAGTGCCCCGCCGCGTTGGAAAACATTGACCTCTGGCGCCGGAACAATCTCGACTGCATAGTCATTGATGTGATTTTGGTGCCCAAAAGGACTTGTTCAATGAAGGAAAGATGCCCTTTTGATCGGGAAGAATTGGGGGTTGTGGGAAGGACTGAAAAGATTGTGGAGAGGTGGGTTGTGCAGTATGAGAATAGGAAGACTAGGGATTCTAATACTGCCACTAGGAGGTCAACCAATGTTTCTTTGCATAACTTGTATAAGAAATCAACTTTGCTTTTGAGGTCTTTGTATGCCACTGTTAGACTTTTACCTGCCTATAAACTTTTCAGAGACCTTAATTCCTCTGCACAGATTAGGGACTTTACCCTTGCTCACCGAGTGTCTTCTTTTGTTGAGCCCTTCACCCGGAAAGAAGAGGCTGGAATGACAACATTCGGCTTCACCCCTGTGGACACTTCTTCTGGTAGGTTGTGTCTTAGTGTCATGTATTGCTGCCCCTCAGCCTCAGATGCCAGTTCTGAACCTTTGACTCCAATGTCCCCAAGAGTTATAACCGACTATGTTGGGAGTCCATTGGCTGATCCGTCGAGGAGGTTTCCTTCTCTTCCTGTGGCAGGATTGCCATTGCATGGCTCTCCATCATCGCTGCCATCTTCAAGGCAGCGTAGTTTGAGTTTTGATCATTATAGAGCCTCACCTCCTTCTTATTTACCTTCACCTACTCATTCAGAATTACTCTCATCAGTGTATAATGCAAGCTTGCGGCGTTTTCACCCTGCAAGTTTGCCTCCTCATCCAACCGAGATGTCTTTGATTCAGAAGAAGAATACAAATTTTGATGATTATTATCCCTCTCCATCACCTTCAACCTATTCTGGGCCATTACCATGTAAACCACTTTTACGATCTGAAAGTGCTCCAGTCAGCATACCTACTGCTGAACTTGCCAATTCCCCTGGATATTCCAATAGGCAGAATTTGGCTCCATCTCCTCCCCTAAGAGGTTCAAGGGGCACTGCTAAGAATGATAGAAATGCAAATGCGATGCAAACGGGTGCAACAACTGAGAAGTTGTTTTCTCTTGTAAAAGATGAGTCTCGGAAATATTCTGGAATACTTGAAGCTGGAGGATTCTTTCCCATTAGAAAGTCTCAAGATGCTGCTGTTGGCGCGCTTGTACATATGCTGAAGAAAGCGCCACCTCTTTGTCAAGATTTCTCCACTTCACAACACCCTGAAACCTGGAACAATAACATTCAACGGCCCAATCAGATCCTAGAGGCACCAAGGCCAGTGAGCAGCATAATGTCTTCTGGGAGGAAAACAACAGCTGATGCATTGGAAGAGTTCCATGGTTACAAAGAGATGAAAAACATGCTGCTTATGCGAGTTAGTAAGCACCAGAAATAG 1611 0.4556 MASDAAKMEQIITEFFAKSLHIILESRALYVSSRNSFGDQAVLSPCSSSSSSSSVRPRDKWFNLALRECPAALENIDLWRRNNLDCIVIDVILVPKRTCSMKERCPFDREELGVVGRTEKIVERWVVQYENRKTRDSNTATRRSTNVSLHNLYKKSTLLLRSLYATVRLLPAYKLFRDLNSSAQIRDFTLAHRVSSFVEPFTRKEEAGMTTFGFTPVDTSSGRLCLSVMYCCPSASDASSEPLTPMSPRVITDYVGSPLADPSRRFPSLPVAGLPLHGSPSSLPSSRQRSLSFDHYRASPPSYLPSPTHSELLSSVYNASLRRFHPASLPPHPTEMSLIQKKNTNFDDYYPSPSPSTYSGPLPCKPLLRSESAPVSIPTAELANSPGYSNRQNLAPSPPLRGSRGTAKNDRNANAMQTGATTEKLFSLVKDESRKYSGILEAGGFFPIRKSQDAAVGALVHMLKKAPPLCQDFSTSQHPETWNNNIQRPNQILEAPRPVSSIMSSGRKTTADALEEFHGYKEMKNMLLMRVSKHQK 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2099 536 Pfam Autophagy-related protein 13 12 230 IPR018731 GO:0006914|GO:1990316
Aed5g2099 536 PANTHER UNCHARACTERIZED 3 438 IPR040182 GO:0000045
Aed5g2099 536 PANTHER UNCHARACTERIZED 445 535 IPR040182 GO:0000045
Aed5g2099 536 MobiDBLite consensus disorder prediction 379 417 - -
Aed5g2099 536 Gene3D HORMA domain 4 233 IPR036570 -
Aed5g2099 536 MobiDBLite consensus disorder prediction 379 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2099 Aed-Chr5 23361798 23366732 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2099 K08331 - gmx:100798585 683.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2099 5 23361798 23366732 Aed5g2099 5 23361798 23366732 ECH