Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2072 ATGATTGAAGGTTACAAAAGCACAGACGCCAGAACCAGAATCATTCATTCATCATCATCAGTGCCCCAAACAAAGAGAGAAGAAGAAGAAGAAGCAAAGTACAACAAAACACACGGAACCGAACTCTGCTCCTTCTCTTCCTCTCTAACATTACATTACCACCCTTCTGCGTCGTCGAAGACTGCACTTGATGTGGCATCATGGACGTTCAATATAGTCACATCTGTGGGAATAATCATTGTGAATAAAGCCCTCATGGCTACATATGGTTTCAGCTTTGCTACAACGTTAACTGGTCTGCATTTTGCCACAACAACCTTGCTGACAATCTTTCTTAAGTGGCTGGGATATATCCAAACCTCTCATCTTCCAATACCTGATCTTATCAAATTTGTCTTATTTGCAAATTTCTCTATTGTCGGGATGAATGTGAGTTTGATGTGGAACTCTGTCGGTTTCTATCAGATTGCTAAGCTGAGTATGATTCCAGTATCTTGCTTCCTGGAAGTTATCTTGGACAATGTGCGATATTCAAGGGACACAAAACTCAGCATTTCTCTAGTTCTCCTTGGCGTTGCTGTATGTACAGTCACTGATGTGAGTGTCAATGCTAAGGGTTTTATAGCTGCTGCAGTGGCAGTTTGGAGCACCGCACTACAGCAGTATTATGTGCATTTTCTTCAGAGGAAGTATTCTCTTGGATCGTTTAGCTTGTTGGGCCACACTGCACCAGTACAGGCAGCAAGTTTACTGCTAGCAGGTCCATTCGTGGATTATTGGCTGACAAATAAACGAGTTGACGCCTACAACTTTAGTTTGACATCCACTTTGTTCATCATTATCTCTTGCACTATTGCAGTAGGGACAAACCTCAGCCAGTTCATCTGCATTGGCAGGTTCACAGCTGTATCCTTCCAAGTCCTTGGACACATGAAGACTATTCTGGTACTGGCCCTAGGATTCGTTTTCTTTGGTAAAGAAGGTCTGAATTTACATGTGATTCTTGGCATGATGATTGCAATAGCTGGAATGATATGGTATGGCAATGCATCTTCTAAGCCAGGAGGGAAGGAACGTCACGTCTTACCCACTAATCATACCCCCACCAAGTCACAAGAGTATAATGTACTACTACCCGTATCCTCTGAAACGGATCAGGAAATATAG 1167 0.4267 MIEGYKSTDARTRIIHSSSSVPQTKREEEEEAKYNKTHGTELCSFSSSLTLHYHPSASSKTALDVASWTFNIVTSVGIIIVNKALMATYGFSFATTLTGLHFATTTLLTIFLKWLGYIQTSHLPIPDLIKFVLFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVILDNVRYSRDTKLSISLVLLGVAVCTVTDVSVNAKGFIAAAVAVWSTALQQYYVHFLQRKYSLGSFSLLGHTAPVQAASLLLAGPFVDYWLTNKRVDAYNFSLTSTLFIIISCTIAVGTNLSQFICIGRFTAVSFQVLGHMKTILVLALGFVFFGKEGLNLHVILGMMIAIAGMIWYGNASSKPGGKERHVLPTNHTPTKSQEYNVLLPVSSETDQEI 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2072 388 PANTHER SOLUTE CARRIER FAMILY 35 57 364 - -
Aed5g2072 388 PANTHER UDP-RHAMNOSE/UDP-GALACTOSE TRANSPORTER 4 57 364 - -
Aed5g2072 388 MobiDBLite consensus disorder prediction 16 35 - -
Aed5g2072 388 Pfam Triose-phosphate Transporter family 73 347 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2072 Aed-Chr5 23185301 23189676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2072 68 387 Organic Solute Cotransporters AT1G77610 25.575 1.67e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2072 - - gmx:100814890 588.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2072 5 23185301 23189676 Aed10g0582 10 4667500 4671429 PCT