Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2032 ATGGGAGTTGGAGGCACACTGGAGTACTTGTCTGATCTAATGGGAAGTGGCTACCACCACAAGAAGAAGAAGAAGCAGTTCCAAACCGTGGAGCTCAAGGTGAGAATGGATTGTGATGGTTGTGAGCTTAAGGTCAAGAACGCCCTCTCTTCACTAAGTGGGGTGAAATCCGTGGAGATAAACCGAAAACAGCAGAAAGTGACAGTAACTGGGTATGTTGAACCAAACAAGGTGCTGAAGAAGGCTAAATCAACAGGAAAAAGGGCTGAGATTTGGCCCTATGTGCCTTACAACTTGGTGGCACATCCATATGCAGTTACAGCTTATGACAAGAAGGCTCCTCCTGGTTATGTGAGAAGAACCGAGGTCCCTGCAAACACTGGAACCATCACAAGATATGAAGACCCTTACATCACCATGTTCAGTGATGACAACCCAAATGCATGCTCTATCATGTAG 459 0.4619 MGVGGTLEYLSDLMGSGYHHKKKKKQFQTVELKVRMDCDGCELKVKNALSSLSGVKSVEINRKQQKVTVTGYVEPNKVLKKAKSTGKRAEIWPYVPYNLVAHPYAVTAYDKKAPPGYVRRTEVPANTGTITRYEDPYITMFSDDNPNACSIM 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2032 152 ProSiteProfiles Heavy-metal-associated domain profile. 36 91 IPR006121 GO:0046872
Aed5g2032 152 SUPERFAMILY HMA, heavy metal-associated domain 27 93 IPR036163 GO:0046872
Aed5g2032 152 PANTHER - 3 152 - -
Aed5g2032 152 Pfam Heavy-metal-associated domain 33 87 IPR006121 GO:0046872
Aed5g2032 152 Gene3D - 17 93 - -
Aed5g2032 152 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 3 152 IPR045181 GO:0046872
Aed5g2032 152 CDD HMA 31 90 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2032 Aed-Chr5 22917996 22919583 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2032 - - gmx:100500473 296.589
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2032 5 22917996 22919583 Aed7g1976 7 22695882 22696730 PCT