Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2021 ATGTTCATCGAGAGCTTCAAGGTTGAGAGTCCTAATGTGAAGTACACAGAGACTGAGATTCAGTCCGTGTACAACTATGAAACCACTGAACTTGTTCACCAGAACAAGAATGGCACTTATGAGTGGGTTGTGAAGCCCAAAACTGTTAAATATGATTTTAAAACCAACACCCATGTACCTAAACTAGGGGTAATGCTTGTGGGGTGGGGTGGAAACAATGGCTCAACCCTCACTGGTGGTGTTATTGCTAACCGAGAGGGTATTTCGTGGGCAACAAAGGACAAGATTCAACAAGCTAATTATTTTGGGTCACTGACCCAGGCATCAGCTATCAGAGTGGGGTCCTTCCAAGGGGAGGAAATATATGCCCCATTCAAGAGCCTACTTCCAATGGTAAACCCAGATGATGTTGTGTTTGGGGGATGGGATATCAGTAACTTGAACCTTGCGGACGCCATGGCCAGGGCCAAGGTGTTTGACATCGACCTGCAGAAACAGTTGGGTCCTTACATGGAATCCATGGTTCCACTCCCCGGAATCTATGACCCCGATTTCATTGCTGCCAACCAAGAAGACCGTGCCAACAACGTGATTAAGGGCACAAAGAATGAACAAGTTCAACAAATCATCAAAGATATTAAGGAGTTCAAGGAAAGCAGCAAGGTTGACAAGGTGGTTGTTCTATGGACAGCCAACACAGAGAGGTACAGCAACGTAGTTGTTGGACTAAACGACACCATGGAAAATCTCTTGGCTTCCATAGACAGGAACGAGTCTGAGATTTCACCTTCCACCTTGTATGCCATTGCTTGTGTTTTGGAAAATGTTCCTTTCATCAATGGAAGCCCTCAGAACACCTTTGTTCCAGGGTTGATTGATCTGGCTATCAAGAAAAACAGTTTGATTGGAGGAGATGACTTTAAGAGTGGTCAGACCAAAATGAAATCCGTGTTGGTGGATTTCCTTGTCGGGGCCGGTATCAAGCCAACATCAATAGTGAGTTACAACCATCTGGGAAACAATGATGGCATGAATCTTTCAGCCCCTCAAACCTTCCGCTCTAAGGAAATTTCCAAGAGTAATGTTGTTGACGACATGGTCAACAGCAACGCCATCCTCTATGAGCCTGGTGAACATCCAGACCATGTCGTTGTTATTAAGTATGTGCCTTACGTTGGGGATAGCAAGAGGGCCATGGATGAATACACTTCAGAGATATTCATGGGTGGAAAGAGCACAATTGTGTTGCACAACACTTGTGAGGATTCACTGTTAGCTGCTCCTATTATCTTGGACTTGGTCCTTCTTGCTGAGCTTAGCACTCGAGTCCAGTTTAAAGCTGAAAATGAGGTGGGCAAGTTTCACTCATTCCACCCAGTTGCGACAATCCTCAGTTACCTGACCAAGGCCCCTCTGGTTCCACCGGGTACACCAGTGGTGAATGCGTTGTCAAAGCAGCGAGCTATGCTGGAAAACATAATGAGGGCTTGTATTGGATTAGCTCCTGAGAACAACATGATCCTCGAGTACAAATGA 1536 0.4557 MFIESFKVESPNVKYTETEIQSVYNYETTELVHQNKNGTYEWVVKPKTVKYDFKTNTHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDKIQQANYFGSLTQASAIRVGSFQGEEIYAPFKSLLPMVNPDDVVFGGWDISNLNLADAMARAKVFDIDLQKQLGPYMESMVPLPGIYDPDFIAANQEDRANNVIKGTKNEQVQQIIKDIKEFKESSKVDKVVVLWTANTERYSNVVVGLNDTMENLLASIDRNESEISPSTLYAIACVLENVPFINGSPQNTFVPGLIDLAIKKNSLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVNSNAILYEPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKSTIVLHNTCEDSLLAAPIILDLVLLAELSTRVQFKAENEVGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENIMRACIGLAPENNMILEYK 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2021 511 Pfam Myo-inositol-1-phosphate synthase 310 423 IPR013021 -
Aed5g2021 511 PANTHER INOSITOL-3-PHOSPHATE SYNTHASE 1 511 - -
Aed5g2021 511 Gene3D - 381 511 - -
Aed5g2021 511 Gene3D - 1 356 - -
Aed5g2021 511 PANTHER MYO-INOSITOL-1 PHOSPHATE SYNTHASE 1 511 IPR002587 GO:0004512|GO:0006021|GO:0008654
Aed5g2021 511 PIRSF Myoinositol-ppht_synth 50 511 IPR002587 GO:0004512|GO:0006021|GO:0008654
Aed5g2021 511 Pfam Myo-inositol-1-phosphate synthase 62 495 IPR002587 GO:0004512|GO:0006021|GO:0008654
Aed5g2021 511 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 511 IPR036291 -
Aed5g2021 511 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 309 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2021 Aed-Chr5 22871047 22874387 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2021 K01858 - gmx:100800820 988.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2021 5 22871047 22874387 Aed7g1970 7 22641467 22644409 PCT