Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1957 ATGTGGTGGATGATGAGCGAGACTGGAGGCAGTTACTGTTCTAAGAAGACCGATGATTTGTGCACCAATGTTTGTGATCAGGAATCAAGTCAGGTATCCGGGATGTCACGAATTCGCTGTATTCTGCGTGGTTTGGATGTGAAAACCTATATATTTATGTTTGCTGTTATCCCAATGTGCGTCTTTGGATTCTATGTACATGGGCAGAAGATCTCATACTTTCTGCGGCCGTTATGGGAAAAAGCACCCAAGCCTTTCAATGTCATCCCTCATTACTATAACGAAAATGTCACCATGGAGAATCTCTGCAGACTTCATGGCTGGGGAATCCGGGAGTACCCTCGACGTGTTTATGATGCTGTGTTGTTTAGCAATGAATTGGAGATACTAACCTTGCGCTGGAAAGAGCTGTACCCTTACATAACTGAATTTGTTCTCCTTGAGTCAAATTCTACCTTTACTGGATTGCCCAAGCCTCTGGTTTTCAACATCAATAGGGAGCAGTTCAAATTTGTGGAGCCCCGGTTAACTTACGGGACCATTGGTGGGAGATTTAAGAAAGGAGAAAACCCATTTGTCGAGGAGGCGTATCAGCGTGTGGCATTGGACCAGCTCCTCAAGATAGCTGGTATTACCGATGATGACTTGTTGCTTATGTCTGATGTGGATGAGATACCAAGTGCTCACACTATTAACCTCCTGAGGTGGTGTGATGAAGTACCCTCAATCCTTCACCTGCAGCTGAAAAATTATCTCTATTCATATGAATTTCACGTGGATGACAAGAGCTGGAGGGCTTCAATTCACAGGTATCAGACTGGTAAGACGAGGTATGCACATTATCGCCAGTCTGATGACATATTGGCAGATTCTGGCTGGCATTGTAGCTTTTGCTTCCGTCGAATCAGCGACTTCATTTTCAAGATGAAAGCCTACAGCCATTATGATAGAGTCAGGTTCTCTCATTATTTAAATCCTGAAAGAATTCAGAAGGTAATCTGCAAAGGGACTGATTTATTTGATATGCTGCCGGAGGAGTACACTTTCAGGGATATCATTGGTAAAATGGGACCAATACCCCGTTCCTATTCTGCAGTTCATCTTCCTGCTTTTCTTCTGGAAAATTCTGAGAAGTATAAATTTCTTTTGCCTGGAAATTGCCAGAGAGAGAGATGA 1176 0.4328 MWWMMSETGGSYCSKKTDDLCTNVCDQESSQVSGMSRIRCILRGLDVKTYIFMFAVIPMCVFGFYVHGQKISYFLRPLWEKAPKPFNVIPHYYNENVTMENLCRLHGWGIREYPRRVYDAVLFSNELEILTLRWKELYPYITEFVLLESNSTFTGLPKPLVFNINREQFKFVEPRLTYGTIGGRFKKGENPFVEEAYQRVALDQLLKIAGITDDDLLLMSDVDEIPSAHTINLLRWCDEVPSILHLQLKNYLYSYEFHVDDKSWRASIHRYQTGKTRYAHYRQSDDILADSGWHCSFCFRRISDFIFKMKAYSHYDRVRFSHYLNPERIQKVICKGTDLFDMLPEEYTFRDIIGKMGPIPRSYSAVHLPAFLLENSEKYKFLLPGNCQRER 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1957 391 Pfam Glycosyltransferase family 17 45 390 IPR006813 GO:0003830|GO:0006487|GO:0016020
Aed5g1957 391 PANTHER BETA-1,4-MANNOSYL-GLYCOPROTEIN BETA-1,4-N-ACETYLGLUCOSAMINYL-TRANSFERASE 1 391 IPR006813 GO:0003830|GO:0006487|GO:0016020
Aed5g1957 391 PANTHER BETA-1,4-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN 1 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1957 Aed-Chr5 22503888 22507227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1957 1 390 Glycosyltransferase AT1G12990 77.949 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1957 K00737 - gmx:100787062 795.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1957 5 22503888 22507227 Aed5g1957 5 22503888 22507227 ECH
Aed5g1957 5 22503888 22507227 Aed7g1930 7 22328734 22331225 PCT