Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1952 ATGGGGACCAGTTCTCGCAGTTCTACCAATAGAAAACCAAGTGATAGTATGAGGCTTATGGTGACAACTTTTGTTGGAATAGTTTTTGGCGTCTTCGTAGGAGTTTCATTTCCGGCATTGAATACAAAGTTGAATCTCCCATCCAATCTGCTTCCCGCCATTGATTTTGATATTTCTTACATTCAAGAGAAATATGCAGGTGGCAATGCACCATCTTTTGTGAAGAATAATAACAGCATCTTATCAAAGCATCAGTCAATAAATGATACATTGAAGATATGGGTTCCATCAAATCCAAGAGGTGCAGAAAGATTACCTCCTGAGATTATTGAAGCAGAGACAGACTTTTATTTGCGTAGATTGTGGGGTCAGCCTAATGAGCTCCGTTACTTGGAACAGTTCTCAGAGAACTTTACAATAGTTCTATTTCATTATGATGGCCACACAACTGAATGGGATGAGTTTGAGTGGTCAAAGCGGGCAATTCATATGAGTGTTCGCAAACAGTCCAAATGGTGGTATGCCAAGCGGTTTCTGCATCCTGACATTGTGGCACCATATGACTATATTTTTATATGGGATGAAGACCTGGGTGTTGAACATTTTAATGCAGAGGAATACTTAAAACTGGTGAAGAAGCATGGGTTGGAGATTTCACAGCCTGGTTTGGAACCTAATAAAGGATTGACATGGCAAATGACAAAGAGAAGAGGTGATCGTCAAGTTCACAAAGAAACAGAGGAGAAACCAGGATGGTGCAGTGACCCTCATCTGCCTCCTTGTGCAGCGTTTGTTGAGATTATGGCTCCAGTGTTTTCACGAGATGCATGGCGTTGTGTGTGGCATATGATTCAGAATGATTTGGTCCATGGCTGGGGCCTTGATTTTGCTCTTAGAAAATGTGTTGAGCCTGCCCATGAGAAAATTGGAGTTGTTGATTCTCAGTGGATTATTCATCAAAGTGTTCCCTCACTAGGGAGTCAGGGAGAAACACAATCTGGGAAAGCGCCATGGCAAGGGGTGAGGGACAGGTGTAAAAAGGAGTGGACAATGTTTCAGAGTCGGTTGGCAAATGCAGAAGACGCATATTACAAGGCTGTGGGGGGAGTTGATGTGTTTAATTCGACTACTTAG 1134 0.425 MGTSSRSSTNRKPSDSMRLMVTTFVGIVFGVFVGVSFPALNTKLNLPSNLLPAIDFDISYIQEKYAGGNAPSFVKNNNSILSKHQSINDTLKIWVPSNPRGAERLPPEIIEAETDFYLRRLWGQPNELRYLEQFSENFTIVLFHYDGHTTEWDEFEWSKRAIHMSVRKQSKWWYAKRFLHPDIVAPYDYIFIWDEDLGVEHFNAEEYLKLVKKHGLEISQPGLEPNKGLTWQMTKRRGDRQVHKETEEKPGWCSDPHLPPCAAFVEIMAPVFSRDAWRCVWHMIQNDLVHGWGLDFALRKCVEPAHEKIGVVDSQWIIHQSVPSLGSQGETQSGKAPWQGVRDRCKKEWTMFQSRLANAEDAYYKAVGGVDVFNSTT 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1952 377 Pfam Protein of unknown function (DUF707) 131 361 IPR007877 -
Aed5g1952 377 PANTHER PROTEIN, PUTATIVE (DUF707)-RELATED 132 376 - -
Aed5g1952 377 PANTHER OS06G0731900 PROTEIN 132 376 IPR007877 -
Aed5g1952 377 PANTHER OS06G0731900 PROTEIN 3 127 IPR007877 -
Aed5g1952 377 PANTHER PROTEIN, PUTATIVE (DUF707)-RELATED 3 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1952 Aed-Chr5 22472410 22478084 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1952 - - gmx:100805311 702.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1952 5 22472410 22478084 Aed7g1924 7 22298163 22303648 PCT