Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1940 ATGGCCGGCGCCGGCGACCTAGATGACGATGCGGTGCTCAGCGACGTCGAGGACGACGGCGGCAGTCCGATTCCGATCGCCACCAAGCTTCCCTCGTCGGAAGACGTCTCCGTCGATCAACTTCGGGATGTTCTCGCGGAGCTCGATCGGGAGCGGCAAGCGCGCCTCGCCGCAGAAAATACCAAGTCTGAATTGCAGGTTTCGTTCAATCGATTGAAGGCGCTGGCACACGAGGCGATAAAGAAGCGCGACGAGTTCGGTCGCCAGCGAGACGACGCCGTTCGGGAGAAGGAGGAGACAGCGAAGCAACTAGAGGAAACCGCGAAGGAACGCGACGCGCTGCGATCGGAGATTGGGAATTCGAGCCATATGCTCGTCACCGGCATGGAGAAGATCTCGGCGAAGGTGAGCACCTTCGCCGGCAACGCGCTGCCACTTCCGCGGTCGCAGAAATACACCGGCATGGCGGCAGTGGTGTACGGCGTAGTCAAGCGCGCGAACGAGATCGTGGAAGAGCTTTTGAAGCAGAACGAAGCAACCGCGAAGGGTAGGAACGAAGCTCGGGAGCAGATGGAGCAGCGGAATTACGAGATTGCCATTGAGGTTTCTCAGCTCGAGGCCACGATCAGTGGCTTGAGGGATGAGGTTGAAAAGAAGGTTTCAATTGTTGAGGGTTTGGAGAGGGATTTGGCTGTTAGGGATCAGAGGCTGAATGAGGTTTCGGAGAATTTGAGTAAGGAGCAAAGTGAGGCTTTGCAGTTGAAGGAGTTTGTTGGTGAGTGTGAGGACAAGTTGAATAAGTTGGAATCTCGAATGGAATCACAAAGGCCTTTGTTGATTGATCAGTTGAGTTTTGTTTCCAAAATTCATAACCAGATTTGCAATGTTGTTAAGATACTTGATGATGGTGGCACCTCAGAGCTGTCTGAATCGTTGTTTGTCCCGCAAGAAACGGACCTTGAGGAGAATATTCGCGCCTCTTTGGCTGGGATGGAGTCCATTTACGAGTTGACTAAGATTGTTGTTCAGAAAGCTAAGGATGTGGTTGAGGAGAAGGATTGTCAGATTAAGAGTTTAGACGAGATGTTGGCTCGGTTAGTTAAGGAGAAGGATCAAATTGGTTCTTTGCTTAGGAGTGCTTTGTCTAAGAGGATGGCAATCGATCCATCTTCTAGAAAGAATGAGCTGTTTCAAGCTGCAGAGAATGGGTTGAGGGACGCTGGGATAGATTTCAAATTTAGTAAGCTTCTTGGAGATGGAAAGGTTGCAGCTTCAAATGACAAGTCTACAGCGGAAAAACAAGAGGATGAAATATACTCCTTGGCTGGTGCTTTGGAGGATGTTGTTAAGGCATCTCAGCTTGAGATCATTGAGCTTAAGCATACTGTCGGTGAATTAAGGGCAGAGTTGAGCTTACTTAAGCAGCATATAGAAGCTCAGGCCAAGGAGCTTGACCATAGAATGCATCGGATAGAGGAACTTGAAGAGAAGGAGAGAGTGGCAAATGAAAATATTGAGGGGCTAATGATGGACATTGCTGCTGCTGAAGAGGAAATTAACAGATGGAAAGTGGCAGCAGAGCAAGAAGCTGCTGCAGGCACAGGCGTGGAACAAGAATTTGTGGCACAGTTGTCAACACTTAAGCAGGAACTTGAAGAGGCAAAGCAATCCATGTTAGAATCAGAGAAGAAACTAAAATTCAAAGAAGAGACAGCTGCTGCCGCCATGGCAGCCAGAGATGCAGCAGAAAAGTCTCTCAAGTTAGCAGACTTGAGGTCATCCAGACTAAGAGACAGAGTAGAGGAGCTTACTCATCAGCTCGAAGAGTTTGAGAACAGGGAAGACTTAAGGAGCCATAGTCGGCCTAGATATGTGTGTTGGCCATGGCAGTGGCTCGGCATGGACTTTGTTGGATTTCAGCACCGACCTGATACACAACAGGAAGCTTCTAACGAAATGGAACTTTCTGAACCTCTCTTATAA 1983 0.4922 MAGAGDLDDDAVLSDVEDDGGSPIPIATKLPSSEDVSVDQLRDVLAELDRERQARLAAENTKSELQVSFNRLKALAHEAIKKRDEFGRQRDDAVREKEETAKQLEETAKERDALRSEIGNSSHMLVTGMEKISAKVSTFAGNALPLPRSQKYTGMAAVVYGVVKRANEIVEELLKQNEATAKGRNEAREQMEQRNYEIAIEVSQLEATISGLRDEVEKKVSIVEGLERDLAVRDQRLNEVSENLSKEQSEALQLKEFVGECEDKLNKLESRMESQRPLLIDQLSFVSKIHNQICNVVKILDDGGTSELSESLFVPQETDLEENIRASLAGMESIYELTKIVVQKAKDVVEEKDCQIKSLDEMLARLVKEKDQIGSLLRSALSKRMAIDPSSRKNELFQAAENGLRDAGIDFKFSKLLGDGKVAASNDKSTAEKQEDEIYSLAGALEDVVKASQLEIIELKHTVGELRAELSLLKQHIEAQAKELDHRMHRIEELEEKERVANENIEGLMMDIAAAEEEINRWKVAAEQEAAAGTGVEQEFVAQLSTLKQELEEAKQSMLESEKKLKFKEETAAAAMAARDAAEKSLKLADLRSSRLRDRVEELTHQLEEFENREDLRSHSRPRYVCWPWQWLGMDFVGFQHRPDTQQEASNEMELSEPLL 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1940 660 MobiDBLite consensus disorder prediction 1 35 - -
Aed5g1940 660 PANTHER OS08G0559800 PROTEIN 1 660 IPR040300 -
Aed5g1940 660 Coils Coil 41 61 - -
Aed5g1940 660 Coils Coil 90 117 - -
Aed5g1940 660 Coils Coil 349 369 - -
Aed5g1940 660 Coils Coil 170 190 - -
Aed5g1940 660 MobiDBLite consensus disorder prediction 89 111 - -
Aed5g1940 660 Coils Coil 537 571 - -
Aed5g1940 660 Coils Coil 593 613 - -
Aed5g1940 660 Coils Coil 223 243 - -
Aed5g1940 660 PANTHER PARAMYOSIN 1 660 - -
Aed5g1940 660 Coils Coil 463 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1940 Aed-Chr5 22413062 22418351 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1940 - - gmx:100800693 1140.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1940 5 22413062 22418351 Aed5g1940 5 22413062 22418351 ECH