Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1654 ATGTCTGCTGCTGTGTCTGCAACCAAGGATGTTCCCTTCAATTTGGAGGAAGATGTCAAAAACAAAGGAACCAACAAGGTTGTTGGGGAAGCAGACCAGCTTCCTTACAATGATGGAACTGATTCAGAGGCAGAGGAAGACCCCAAGTTGGAATTGGATCTTGGTCCTCAGTTTTCCCTCAAGGAACAGCTTGAGAAAGATAAAGATGATGAAAGTTTGAGAAAATGGAAGGAGCAGCTTCTGGGAGGTATTGATGTGTCTGCTGTTGGAGAGAACAAAGAGCCAGAAGTGAAGATAGAGAGCCTCACCATAATATGTCCAGGAAGGCCTGATCTCATTCTGCCAATTCCATTCACTTCTGATGCTAAGAAGAGTATCTTCACACTTAAGGAAGGAAGTCAATACCGCTTGAAATTCTCCTTCACTGTCTCAAACAACATTGTTTCTGGCCTCAAATATACCAATGTTGTTTGGAAAACTGGCATTAGAGTGGACAACACCAAAAAAATGTTTGGAACTTATAGCCCAAGCCAGGAGCCATATACATATGAATTGGAAGAAGAAACTACCCCTTCAGGGTTGTTTGCTAGGGGAACCTATTCAGCAAGAACCAAGTTTGTAGATGATGATCGCAAATGTTACTTGGATACTAGTTACCACTTTGAAATTCAGAAGAATTGGCTTACACCCATCTAA 696 0.4195 MSAAVSATKDVPFNLEEDVKNKGTNKVVGEADQLPYNDGTDSEAEEDPKLELDLGPQFSLKEQLEKDKDDESLRKWKEQLLGGIDVSAVGENKEPEVKIESLTIICPGRPDLILPIPFTSDAKKSIFTLKEGSQYRLKFSFTVSNNIVSGLKYTNVVWKTGIRVDNTKKMFGTYSPSQEPYTYELEEETTPSGLFARGTYSARTKFVDDDRKCYLDTSYHFEIQKNWLTPI 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1654 231 SUPERFAMILY E set domains 38 227 IPR014756 -
Aed5g1654 231 MobiDBLite consensus disorder prediction 1 52 - -
Aed5g1654 231 PANTHER RHO PROTEIN GDP-DISSOCIATION INHIBITOR-RELATED 7 229 - -
Aed5g1654 231 Pfam RHO protein GDP dissociation inhibitor 41 226 IPR000406 GO:0005094|GO:0005737
Aed5g1654 231 PRINTS RHO protein GDP dissociation inhibitor signature 206 223 IPR000406 GO:0005094|GO:0005737
Aed5g1654 231 PRINTS RHO protein GDP dissociation inhibitor signature 164 179 IPR000406 GO:0005094|GO:0005737
Aed5g1654 231 PRINTS RHO protein GDP dissociation inhibitor signature 147 163 IPR000406 GO:0005094|GO:0005737
Aed5g1654 231 Gene3D Coagulation Factor XIII, subunit A, domain 1 51 228 IPR024792 -
Aed5g1654 231 PANTHER RHO GDP-DISSOCIATION INHIBITOR 7 229 IPR000406 GO:0005094|GO:0005737
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1654 Aed-Chr5 20606465 20608626 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1654 K12462 - gmx:100806852 426.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g1833 7 21673649 21674789 Aed5g1654 5 20606465 20608626 PCT