Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1639 ATGCAACAACAACAACAAGTGATGAAGAACCGGTGGTTCGTGTGGCTATTGGCGATACTAGGCATAATCGGCGCCACACTCTTCGTAACGAGCCTGATCCAAACCTCGGAGAACAACTTCCTATGTTCCATAACGAGAACGATGCAGCAGCAACAACAGTTAAGCGACGGGCCCACATCGATGCAGCTCAAGGCGATCCTCCACTACGCGACCTCGCAGGTTGTCCCGCAGCAGTCAATCTCGGAGATCACAGTAACCTTCGACGTGCTCCAGGGCCTCCACAGGCCTGCGAACTTCCTCGTGTTTGGGCTGGGCCGCGACTCGCTCATGTGGGCCAGCCTCAACCCGCGAGGCACCACGCTGTTCCTCGAGGAGGACCCCAAGTGGTACCAGACTGTCACCAAGGAAGCGCCATACCTCCGGGCCCACGCCGTCCGCTACCGCACGCAGCTCCGCGAGGCGGACTCCCTCCTCTCCTCGTACCGCTCCGAGCCCGCGTGCTCGCCGGACACCGCCACGCTCCGCGGCAACGAACGCTGCAAGCTTGCGCTTCACAACCTCCCTGATGAGGTGTATGATAAGGAGTGGGACTTGATCATGATCGACGCGCCCAAGGGGTACTTTGCGGAGGCGCCGGGCCGCATGGCGGCGGTGTTCTCCGCCGCGGTGATGGCGCGTGACAGGAAGGGATCCGGCGTGACGCACGTGTTCTTGCACGATGTGGATCGGAAGGTGGAGAAGGCTTATGCGGAGGAGTTTCTGTGTAGGAAGCAGTTGGTCAAAGCTGTTGGGAGGCTCTGGCACTTCGAGATTCCTCCCAAGGCTAATCAAACTCGTGATCACACACGTTTCTGTTAG 858 0.5956 MQQQQQVMKNRWFVWLLAILGIIGATLFVTSLIQTSENNFLCSITRTMQQQQQLSDGPTSMQLKAILHYATSQVVPQQSISEITVTFDVLQGLHRPANFLVFGLGRDSLMWASLNPRGTTLFLEEDPKWYQTVTKEAPYLRAHAVRYRTQLREADSLLSSYRSEPACSPDTATLRGNERCKLALHNLPDEVYDKEWDLIMIDAPKGYFAEAPGRMAAVFSAAVMARDRKGSGVTHVFLHDVDRKVEKAYAEEFLCRKQLVKAVGRLWHFEIPPKANQTRDHTRFC 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1639 285 Gene3D Vaccinia Virus protein VP39 76 284 IPR029063 -
Aed5g1639 285 PANTHER OS11G0490100 PROTEIN 6 285 IPR006514 GO:0045492
Aed5g1639 285 TIGRFAM A_thal_3515: uncharacterized plant-specific domain TIGR01627 63 285 IPR006514 GO:0045492
Aed5g1639 285 Pfam Polysaccharide biosynthesis 82 269 IPR021148 -
Aed5g1639 285 PANTHER POLYSACCHARIDE BIOSYNTHESIS PROTEIN 6 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1639 Aed-Chr5 20496952 20497809 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1639 - - gmx:100820087 516.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g1848 7 21761212 21762069 Aed5g1639 5 20496952 20497809 PCT