Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1634 ATGGCCACCACCACGACAGCAGAGGTTTGCAATATTCTTCTTTTTTCTTTTCAATTTCTCTGCAAAGATCTGATACAATTAATGTTGTTTGTGCAGAAGGATATGGTTATGGAGAACAAGAGTCATCACGAAGAACTGAAACATCTTTGGTTTGTTAAGATTGCGGCAATTAAAGCATCAGAGTGTGTGTTGAATTTCTATGACTTCGCAAAACAAAACTCGGGACCTTTGAGATCTGCTGTTGGAACCGTGGAAGACACTATAACTACCGTTCTGGATCCTATCTACCACAAATTTAAAGCTGTCCCCAATCATCTTCTCCTTTTTGTGGACACTAAGGTGGACGAGGCTGCACACAAATTCGACGAGCATGCACCTTCTTTGGTTAAGAAGGTTGCAACCCAAGTGAATTGTTTGGTTCATGAAGTGACACACAAAGCAGAAAAAGTAGTGAGTGAGGCTCAATCTGGAGGGCCGCGAGCAGCAGCACATTATGTAGCCACAGAGTCAAAGCAAATTGTGCTATTTGGTTCTGTGAAATTGTGGAGTGGTCTCAACCACTATCCACCATTCCATGCAGTGGCAGAGATGGCAGTTCCCACAGCTGCACACTGGTCAGAGAAGTACAACAATGTGGTTAAGGGAATGAGTGAAAAGAATGGTTCAGTGTATGGGTATTTGCCTTTGATTCCAATTGAGGACATAGCCAAGGCATTTAAACAGGGAGAAGGCAATGTGAAAGAAGATGAAGCAGGTTCTGTGGTAGAGAGTCCTTAA 777 0.4299 MATTTTAEVCNILLFSFQFLCKDLIQLMLFVQKDMVMENKSHHEELKHLWFVKIAAIKASECVLNFYDFAKQNSGPLRSAVGTVEDTITTVLDPIYHKFKAVPNHLLLFVDTKVDEAAHKFDEHAPSLVKKVATQVNCLVHEVTHKAEKVVSEAQSGGPRAAAHYVATESKQIVLFGSVKLWSGLNHYPPFHAVAEMAVPTAAHWSEKYNNVVKGMSEKNGSVYGYLPLIPIEDIAKAFKQGEGNVKEDEAGSVVESP 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1634 258 PANTHER REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940 37 253 IPR008802 -
Aed5g1634 258 Pfam Rubber elongation factor protein (REF) 41 241 IPR008802 -
Aed5g1634 258 PANTHER RUBBER ELONGATION FACTOR-RELATED 37 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1634 Aed-Chr5 20458451 20459794 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1634 - - gmx:100499806 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g1853 7 21792658 21795049 Aed5g1634 5 20458451 20459794 PCT