Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1239 ATGCTAGGGTTTACCCTCCCTCTTCAGCTTCAGCTTCGCTGCTGCCACATCCCGCAGCAGCAACCGCCGCTTCCCAGCCCGATTTCGCCCAAACCCTTCTACCCGCCGCCCCTGGTTCCCTCCCTTCCTCCTCGGCCCCGGACCGGACCCGGCCTTCGCGCGAGTTTCCCGGTCGTCGGGTCCGGTCCAGTTTTTGCCGAGGATGAGCTGGACGTGGAGCTGGGGCGGCTGCTGGCGCTGCTGCCCGAGGAGATGCGGTGCCGCGTCAGCGACCACCCCGAGCTGCCGCAGCTGATCGAGGTGGTCATGGACTTGGGCCGGAAACCGCTCGCGAGGTTTCCGTCTGGGGATTTCGTGATATCTGAGTATCCGATCACGGTTGGTGACTTTGCTGTTGATAATCGAGCAGGAATCAGCAGGACATTGCATCGGATTAGTGCCATCAGAAATCGGAAGAGCACAATTATTGGTCTAACTTGTCGAGTTGGCAGGGCAATTTCAGGAAGTGCTAAGTTGTTGCAAGATTTGATTCAAGATGGGGCTTCTTTGTTGCTCATTGGGCCTCCAGGAGTAGGCAAAACTACAATTATTAGGGAAGTAGCTAGGATGCTGGCAAATGATTACAAGAAGCGTGTGATGATTGTTGACACCTCCAATGAAATTGGGGGTGATGGTGATATACCTCATGCTGGAATAGGCAATGCTCGACGTATGCAAGTCCCCAACTCAGATATGCAACATAAGGTCTTGATAGAAGCAGTGGAAAACCACATGCCACAAGTGATTGTAATTGATGAAATTGGTACAAAACTTGAAGCTATGGCTGCGAGCACAATTGCACAACGTGGGATTCAGCTTGTTGCCACTGCTCATGGAATCACAATTGAGAATCTGATCATGAATCCTTCCTTAGAGATGCTTGTTGGAGGAATACAGAGTGTGACACTAGGGGATGAAGAGGCCAGTCGCAGGGGTGTTCAGAAGACAGTACTGGAGAGGAAAGGACCATCTACGTTTAGTTGTGGAGTGGAGATTATTTCAAAGACAGAGTTGCGCATTCACCGTAGCCTTGAAGCAACTGTGGATGCTATTCTTTCTGGTCGTTTTCCAAATGTAGAAATACGGAAGATGAAGTCTCAAGAACATGAAGAGATTTTACATGAAGGACCCCTTAGTGACAGTTCTCTTCAAAAGAATGGTGAAATTATGTTTGAAGAAGCTATAAAGGCTGCAGATGACCAAACCAGCCAAAATGAATCACTTTTGAAGTTGCCTATTGACTTGGTGGAAGATTCCTGGCAGCATAAATTGCCACTTAGCCTGTTTTGTTATGGGATTTTAGAGGCAACTGTTATTCAAGGGATTAAGCAGTTGAGAATGAATGATGCGGCCATTCAATTGACTGATAATATTAGTGAAGCAAATGCTTTACTTGCATTGCAATCCAAGCTTAAAAAGAACCCAGGGATCCAGGCTGCTGCTAAATCTCATGATATTCCCATTTATGTGACAAAGACAAGTTCTTTGGAGCATGTAACAAAAGCTATACGGGCATTAGTAAGTGATCATGAAGATGGTATGAAGGACTCTGAACAAACGGACAAGATAACATCATCAGAGATGATTGATGCTTTGGAGGAGGCACGAATGGCTATAGAGCATACAGTGATTCTAAAGGGAGAACCTGTGGATCTACTCCCAAGATCATCACACATAATATCTCTGCAGCTGGAACTTGCTCGTAAATACCAACTTGAAACAAGGAGAATCAGTGGAGATTCAGGTGTGCATCTCCTCATACTTCCATCCCATTATGAAACGGATGAAGTAAAAACTAGTGAAAATTCTGAGTTCGATAGTGAAGAATTAGATGACTTTGCTGCCTCCAATGGCAGCAATGTGAATGGCTCAGTCAACAGATTGCCCCTGCTACCCGAGTAG 1941 0.4683 MLGFTLPLQLQLRCCHIPQQQPPLPSPISPKPFYPPPLVPSLPPRPRTGPGLRASFPVVGSGPVFAEDELDVELGRLLALLPEEMRCRVSDHPELPQLIEVVMDLGRKPLARFPSGDFVISEYPITVGDFAVDNRAGISRTLHRISAIRNRKSTIIGLTCRVGRAISGSAKLLQDLIQDGASLLLIGPPGVGKTTIIREVARMLANDYKKRVMIVDTSNEIGGDGDIPHAGIGNARRMQVPNSDMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGITIENLIMNPSLEMLVGGIQSVTLGDEEASRRGVQKTVLERKGPSTFSCGVEIISKTELRIHRSLEATVDAILSGRFPNVEIRKMKSQEHEEILHEGPLSDSSLQKNGEIMFEEAIKAADDQTSQNESLLKLPIDLVEDSWQHKLPLSLFCYGILEATVIQGIKQLRMNDAAIQLTDNISEANALLALQSKLKKNPGIQAAAKSHDIPIYVTKTSSLEHVTKAIRALVSDHEDGMKDSEQTDKITSSEMIDALEEARMAIEHTVILKGEPVDLLPRSSHIISLQLELARKYQLETRRISGDSGVHLLILPSHYETDEVKTSENSEFDSEELDDFAASNGSNVNGSVNRLPLLPE 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1239 646 PANTHER KINASE-RELATED 66 606 - -
Aed5g1239 646 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 66 606 - -
Aed5g1239 646 SMART AAA_5 179 310 IPR003593 -
Aed5g1239 646 MobiDBLite consensus disorder prediction 626 646 - -
Aed5g1239 646 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 309 IPR027417 -
Aed5g1239 646 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 187 206 - -
Aed5g1239 646 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 591 609 - -
Aed5g1239 646 Pfam Sporulation stage III, protein AA 155 309 IPR045735 -
Aed5g1239 646 CDD AAA 180 269 - -
Aed5g1239 646 Gene3D - 161 322 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1239 Aed-Chr5 11274338 11281869 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1239 - - gmx:100807394 1077.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1239 5 11274338 11281869 Aed5g1239 5 11274338 11281869 ECH