Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1179 ATGTCCGCGGTGGTGGTGAAGAGAATCGGCGTGGTGGGCGGTGGTCAAATGGGATCGGGAATAGCCCAAGTCGCCGCCATGCACGGCATCGACGTTTGGCTTCACGACCTCGACCCGCAAGCCCTCTCCAAAGCCTCTTCTTCCATCTCTTCCTCCATCAACCGTTTCGTCTCCAAATCCACCCTCTCTCAGGCTGAGGGTGCCGATGCTTTGAAACGACTGCGTTTCACGACGGATTTGGAGGAGTTCCGCCTTGCGGATTTGATAATTGAGGCGATTGTGGAATCCGAAGAGGTGAAGAAGAGTTTATTTGTGAAACTGGATAAGATTGCGAAGAGTTCCGCGATTCTGGCGTCGAACACGAGCTCCATTTCGATCACGCGTCTAGCATCTTCCACCGGTAGGCCACGTCAGGTGATAGGAATGCATTTTATGAACCCTCCGCCTGTGATGAAATTGATTGAGATTGTACGAGGGGCAGACACTTCCGATGAGACATTTGCTGCTACCAAAGCTTTGTCAGAGAGAGATCTATACAAAAGACTAAGGGTTGAAGAGAACCAAGTGTAA 570 0.5105 MSAVVVKRIGVVGGGQMGSGIAQVAAMHGIDVWLHDLDPQALSKASSSISSSINRFVSKSTLSQAEGADALKRLRFTTDLEEFRLADLIIEAIVESEEVKKSLFVKLDKIAKSSAILASNTSSISITRLASSTGRPRQVIGMHFMNPPPVMKLIEIVRGADTSDETFAATKALSERDLYKRLRVEENQV 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1179 189 PANTHER 3-HYDROXYACYL-COA DEHYDROGENASE FAMILY PROTEIN 6 176 - -
Aed5g1179 189 Pfam 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 9 176 IPR006176 GO:0006631|GO:0070403
Aed5g1179 189 Gene3D - 6 187 - -
Aed5g1179 189 PANTHER 3-HYDROXYACYL-COA DEHYDROGENASE FAMILY PROTEIN 6 176 - -
Aed5g1179 189 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 176 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1179 Aed-Chr5 10276332 10285533 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1179 64 176 Acyl Lipid Metabolism Gene Families AT3G15290 73.451 2.68e-54 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1179 K00074 - gmx:100170753 273.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1179 5 10276332 10285533 Aed5g1179 5 10276332 10285533 ECH