Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1170 ATGATGATTCCATTCCCAAACCCCACCAACTCATTCTCATGTCCCCTTCAGGCATATGAAATGTGTGATGCTGGGGAAGTTATCCACAGTCATGGAATAGAATCTTGTCTTGTAACAATGCTCAATCCTTTAGCAAAGGAATTTCGAATTACTCACATGGAAATGATAAAAGGAATCAAGGGGCATGGTTATTATGATGAACTTGTGGTCCCCATAATAGAGAACACAGCCTACGAATATGAGCTCACACGATCTCTAGCTAAAGCTATTGAAGCCTACCCTAAAACTACAGCAGTGCTTGTACGCAACCATGGAATATATGTTTGGGGAGACTCATGGATCAATGCTAAAACTCAGCATTGCATAGTCCTTGACATTGAAGGAACTACTACTCCCATATCATTTGTTACTGAGGTTCTCTTCCCGTATGCATGTAAAAATGTTGGGAGGCATCTATCTGTGACATATGATACTCTTGATACCCAAGCTGATATTAAGTTGCTTCGATCACAAACTATGAACTATACTTTGGACCACTTAACTTCCTTGCACCATGACCATAGGTTCGAAGAGACCTTGAACAAGGGGTTGCAGGTGCTGTGCCCATTCCCTCTGATGCTGCTGGGAAAAAAAAACATTGCTGCATTAGTAACTAATGTAGAAGCTATGATTAAAGCCGATAGAAAGATCACTGCCTTGAAAATATTGCAGGTAATTAAAAATAATTTAGCAAAACTCTGCTCTTTATTGAATTTAAATTTGAAAGATTTAGCTATGCAGGGTCACATGTGGCAAACTGGTTATCAGAATAAAGAATTGAAGGGAATAGTTTTTGATGATGTACCAAAAGCTCTAGAAAAGTGGCATGACTTGGGCATAAAGGTATACATATTTTCTAGTGGTAGCAGGTTGGCACAAAGGCTAGTATTTGGACATTCAAACCATGGGGACCTAAGAAAATATTTATCTGGCTTTTTTGACACCACAGTGGGGTAA 996 0.3926 MMIPFPNPTNSFSCPLQAYEMCDAGEVIHSHGIESCLVTMLNPLAKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYEYELTRSLAKAIEAYPKTTAVLVRNHGIYVWGDSWINAKTQHCIVLDIEGTTTPISFVTEVLFPYACKNVGRHLSVTYDTLDTQADIKLLRSQTMNYTLDHLTSLHHDHRFEETLNKGLQVLCPFPLMLLGKKNIAALVTNVEAMIKADRKITALKILQVIKNNLAKLCSLLNLNLKDLAMQGHMWQTGYQNKELKGIVFDDVPKALEKWHDLGIKVYIFSSGSRLAQRLVFGHSNHGDLRKYLSGFFDTTVG 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1170 331 PANTHER BIFUNCTIONAL METHYLTHIORIBULOSE-1-PHOSPHATE DEHYDRATASE/ENOLASE-PHOSPHATASE E1-RELATED 120 237 - -
Aed5g1170 331 PANTHER BIFUNCTIONAL METHYLTHIORIBULOSE-1-PHOSPHATE DEHYDRATASE/ENOLASE-PHOSPHATASE E1-RELATED 259 331 - -
Aed5g1170 331 PANTHER BIFUNCTIONAL METHYLTHIORIBULOSE-1-PHOSPHATE DEHYDRATASE/ENOLASE-PHOSPHATASE E1-RELATED 16 119 - -
Aed5g1170 331 Gene3D - 257 331 IPR023214 -
Aed5g1170 331 SUPERFAMILY HAD-like 121 330 IPR036412 -
Aed5g1170 331 Gene3D - 133 241 - -
Aed5g1170 331 PANTHER METHYLTHIORIBULOSE-1-PHOSPHATE DEHYDRATASE 120 237 IPR017714 GO:0005737|GO:0019509|GO:0046872
Aed5g1170 331 PANTHER METHYLTHIORIBULOSE-1-PHOSPHATE DEHYDRATASE 259 331 IPR017714 GO:0005737|GO:0019509|GO:0046872
Aed5g1170 331 PANTHER METHYLTHIORIBULOSE-1-PHOSPHATE DEHYDRATASE 16 119 IPR017714 GO:0005737|GO:0019509|GO:0046872
Aed5g1170 331 SUPERFAMILY AraD/HMP-PK domain-like 17 120 IPR036409 -
Aed5g1170 331 Pfam Class II Aldolase and Adducin N-terminal domain 16 120 IPR001303 -
Aed5g1170 331 Gene3D - 5 128 IPR036409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1170 Aed-Chr5 10136527 10141836 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1170 K16054 - gmx:100794485 404.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1170 5 10136527 10141836 Aed5g1170 5 10136527 10141836 ECH