Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1168 CTAACCCAAAGCGGCAAAGCCCATTTAAACCAATCTAACAGTAACTCTAACGTTAAACCCACCCCACCAAATTTTCAAATTCAAACTTGCCTCTCTCCCTCCCTCCCTTCCCTTTCCACCATGTCGTCCTCCACCGTCGCCGGCGCCGAAACTCCCACTCCGTCAAAAACCCCGTCGAGGCGCAGCAAGAGGAGCCACGCCGATTCCACGTCGTCTCGGTTCGAGGCCTACAACCGGCTCCAGGGCGCCGCCGTGGCCTTCGGCGAGACGCTGCCGATCCCGGAGATCGTGGCGGTGGGCGGCCAGTCCGACGGAAAGAGCTCCCTCCTGGAGGCACTCCTCGGGTTCCGCTTCAACGTCCGCGAGGTCGAGATGGGCACCCGCAGACCCCTCATTCTGCAGATGGTCCACGATTCCTCCGCTCTCGAACCCCGCTGCCGCTTCCAGGAGGAGGATTCAGAAGAGTATGGAAGTCCTGTTGTTTTGGCATCTGCCATTGCAGACATTATAAAGTCCCGAACCGAGGCACTTTTGAAGAAAACCAAGACAGCAGTTTCTCCTAAGCCAATTGTGATGAGAGCTGAGTATGCACATTGTCCTAACCTTACTATTATTGACACACCTGGGTTTGTTCTTAAGGCAAAGAAGGGTGAACCAGATAACACGCCTGATGAAATCCTTTCTATGGTGAAGTCCTTGGCTAGTCCTCCTCACCGCATACTCTTGTTCCTTCAGCAAAGTAGTGTTGAGTGGTGCTCCTCATTGTGGTTGGACTCCATTCGTGAAATTGACCCTACATTTAGACGGACAGTGATCGTTGTCTCCAAATTTGATAACCGTCTCAAGGAATTTAGTGACCGGTGGGAAGTGGATCGCTATTTGAGTGCAAGTGGTTACCTTGGAGATAACACTAACCCCTTTTTTGTGGCCCTGCCAAAGGATAAGGGGAATGTTTCAAATGATGAGTTCCGCAGGCAGATTTCTCAGGTGGATTCAGAGGTTCTTCATCATCTCCGTGAGGGTGTAAAGGGAGGTTTTGATGAAGAAAAGTTCAACTCCTATATTGGCTTTGGCCGTCTGAGAGATTATTTGGAGTCTGAGCTTCAGAAGAAATACAAAGAAGCAGCCCCAGCAACCCTTGCTTTACTCGAGCAACGCTGCGGTGAACTGACTTCTGAACTTGCTAGAATGGATTCAAAAATTCAGGCCACTTCAGATGTTTCCCATCTCAGGAAATTTGCAACGCTGCATGCAGCTTCTATCAGCAATCACGTGGTGGGTAATCATCATGGAGCATTGATTGATGGTGCAGCAGATCCTTCCCCTGAGCTGTGGGGGAAAACAACAGTAGAAGAGAGGTCACGAAGTAGTATTGGGGTATGGCCTGGTGTTACTGCCGATGTAAATCCCCCCAATGCTACTCTTCGTCTTTATGGAGGAGCTGCATTTGAGAGGGTAATGCACGAGTTTCGCTGTGCTGCATATTCCATAGAATGCCCCTCAGTGTCAAGGGAGAAGGTTGCAAATATATTACTTGCTCACGCTGGCCGAGGTGGGGGGAGAGGAATAACAGAGGCTGCTGCAGAGATTGCGCGAGCTGCTGCTAAATCATGGCTTGCTCCTCTTCTTGACACTGCTTGTGACCGGCTTGCTTTTGTCTTGGGAAGTTTATTTGATTTGGCTCTAGAAAGAAACCGCAGTCATGATTCAGAATGTGGGAATAAAGGAGGAGACATGGATGGCTATGTAGGTTTCCATGCTGCTTTAAGATGTGCTTACAATCGCTTCATAGGGGATCTTGCTAAGAAATGCAAGCAACTTGTTAGGCACCACCTTGATTCAGTTACTAGTCCATACTCACAGGTCTGCTACTTCAATGACTTTCAACCATGTTCTTTTGGCTCAAATGCACTCTCTTATAGCAAAGTCCTTGAGTTGAGTGATACTAGTTCTGGTGACGTAAGGCGGGATCAGGAAAACATACCTCCAGAAAAGCATGCACAAGAAACCACACCAGGTAAAGCAGCAGAAACTAGAGATGTTTTGAGAGAAAGCCACATAACTATCCCTGAGACCCCATCTCCTGATCAGCCAGGTGAATATGGGGTGGTGGTTAAAAAGGAACTTGGAATTTGCAATGACATGGGTCCGAAAAAGAGAGCGTCAAGAATGGGAGGGAATAGCAAGAATTCTGACCATGTTAGACTGCAGAATTTATTTGGAAATGGGGAGAGGGAGAGATCAGGTTCACCTTACTCAGATATCTGTGTATCTGCTGCCCAGCATTTTGCACGTATTCGTGAAGTTCTTGTTGAGAGAGGTGTGACATCAACACTAAATTCTGGATTCCTAACCCCTTGGTAA 2364 0.4843 LTQSGKAHLNQSNSNSNVKPTPPNFQIQTCLSPSLPSLSTMSSSTVAGAETPTPSKTPSRRSKRSHADSTSSRFEAYNRLQGAAVAFGETLPIPEIVAVGGQSDGKSSLLEALLGFRFNVREVEMGTRRPLILQMVHDSSALEPRCRFQEEDSEEYGSPVVLASAIADIIKSRTEALLKKTKTAVSPKPIVMRAEYAHCPNLTIIDTPGFVLKAKKGEPDNTPDEILSMVKSLASPPHRILLFLQQSSVEWCSSLWLDSIREIDPTFRRTVIVVSKFDNRLKEFSDRWEVDRYLSASGYLGDNTNPFFVALPKDKGNVSNDEFRRQISQVDSEVLHHLREGVKGGFDEEKFNSYIGFGRLRDYLESELQKKYKEAAPATLALLEQRCGELTSELARMDSKIQATSDVSHLRKFATLHAASISNHVVGNHHGALIDGAADPSPELWGKTTVEERSRSSIGVWPGVTADVNPPNATLRLYGGAAFERVMHEFRCAAYSIECPSVSREKVANILLAHAGRGGGRGITEAAAEIARAAAKSWLAPLLDTACDRLAFVLGSLFDLALERNRSHDSECGNKGGDMDGYVGFHAALRCAYNRFIGDLAKKCKQLVRHHLDSVTSPYSQVCYFNDFQPCSFGSNALSYSKVLELSDTSSGDVRRDQENIPPEKHAQETTPGKAAETRDVLRESHITIPETPSPDQPGEYGVVVKKELGICNDMGPKKRASRMGGNSKNSDHVRLQNLFGNGERERSGSPYSDICVSAAQHFARIREVLVERGVTSTLNSGFLTPW 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1168 787 Gene3D - 60 425 IPR027417 -
Aed5g1168 787 PANTHER DYNAMIN-LIKE PROTEIN C 70 729 - -
Aed5g1168 787 PANTHER DYNAMIN 70 729 IPR022812 -
Aed5g1168 787 MobiDBLite consensus disorder prediction 649 678 - -
Aed5g1168 787 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 90 377 IPR030381 GO:0005525
Aed5g1168 787 CDD DLP_1 91 377 IPR001401 GO:0003924|GO:0005525
Aed5g1168 787 MobiDBLite consensus disorder prediction 1 73 - -
Aed5g1168 787 SMART dynamin_3 70 306 IPR001401 GO:0003924|GO:0005525
Aed5g1168 787 MobiDBLite consensus disorder prediction 1 58 - -
Aed5g1168 787 Coils Coil 380 400 - -
Aed5g1168 787 Pfam Dynamin family 96 276 IPR045063 -
Aed5g1168 787 PRINTS Dynamin signature 196 213 IPR022812 -
Aed5g1168 787 PRINTS Dynamin signature 118 135 IPR022812 -
Aed5g1168 787 PRINTS Dynamin signature 93 111 IPR022812 -
Aed5g1168 787 PRINTS Dynamin signature 265 281 IPR022812 -
Aed5g1168 787 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 69 384 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1168 Aed-Chr5 10100690 10105966 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1168 - - gmx:100786517 1333.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1168 5 10100690 10105966 Aed5g1168 5 10100690 10105966 ECH