Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1165 ATGATGGGGTCCTTCAACATTGAGAAGAAATGGCAATTTCCTCTCATTATGATCTCAATTGTGTTCATATTCTTCCTTGCCACATGCTTCAACATGGGGCTTGTCTCCACAATCCACAGCTTCAACTCAATACTATTTTTTCTTCCATCACGTCTAGCCATGAACCAAACCACTCCAGTTTTTGTGGAGACAAAGGTTTCCTCCTCTTCTGCTACCACCACCACTCCTTCTCCGGCTGCTCCTGCGATCCCTCGCTTTGCCTATTTGATTTCCGGCTCAAAGGACGACTTGGAGAAGCTTTGGAGAACTCTCCTTGCCCTCTACCATCCTTTGAACCACTACCTTGTTCATTTGGACCTCGAGGCGCCACTAGAGGTGAGGTTGGAGCTTGCTTCTAGAATTGAGAAGCAGCCTGTGTTCTCTGAGGTTGGAAATGTTTTCATGTTTAAGAAAGCTAATATGGTCACTTACAGAGGACCAACCATGATTGCTCACACTCTTCATGCTTGTGCCATTCTGCTCAAGAGGACTAAAGACTGGGATTGGTTTATTAACCTCAGTGCTTCAGATTATCCCCTTGTGACTCAAGATGACAGAAGCCTTAACTTCATTGAGCACACAAGTCGTTTGGGATGGAAGCTGGAAAAACGAGCAATGCCTTTAGTTATAGACCCAGGTCTTTACAAGTCAAACAAATCTGATGTTTTCTGGGTTGAATACGTTGTGTGGGGTTGGGACAATCTCCCAAGGACCCTCCTAATGTACTACACCAATTTCATTTCCTCCCCAGAGGGCTACTTCCAAACGGTTGCATGCAACGAGCCAGAGCTAGCCAAGACAGTGGTGAACAGTGACCTGCATTACATTGCATGGGACAACCCTCCCAAACAGCACCCTCATGTCCTCACCGTCAACGACACCGCCAAGATGGTCGCAAGCAACGCTGCTTTTGCTAGGAAGTTCAAGCACAATGATCCTGTCTTGGATGTCATCGACAAAAAACTACTGCAAAGAGAAAATGAACAACAACAACATGTGTTCACCCCTGGTGGTTGGTGTTCTGGAAATCCTATGTGTTCCAAGGTTGGGAACATTTACAAGATCACACCTGGTCCGGGATCTCAGAGGCTTCGGTTACTTGTCACTAAGTTGACTTTGATGGCGAAATTTGGTCAGAGACAATGTAAATAG 1191 0.4584 MMGSFNIEKKWQFPLIMISIVFIFFLATCFNMGLVSTIHSFNSILFFLPSRLAMNQTTPVFVETKVSSSSATTTTPSPAAPAIPRFAYLISGSKDDLEKLWRTLLALYHPLNHYLVHLDLEAPLEVRLELASRIEKQPVFSEVGNVFMFKKANMVTYRGPTMIAHTLHACAILLKRTKDWDWFINLSASDYPLVTQDDRSLNFIEHTSRLGWKLEKRAMPLVIDPGLYKSNKSDVFWVEYVVWGWDNLPRTLLMYYTNFISSPEGYFQTVACNEPELAKTVVNSDLHYIAWDNPPKQHPHVLTVNDTAKMVASNAAFARKFKHNDPVLDVIDKKLLQRENEQQQHVFTPGGWCSGNPMCSKVGNIYKITPGPGSQRLRLLVTKLTLMAKFGQRQCK 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1165 396 Pfam Core-2/I-Branching enzyme 86 310 IPR003406 GO:0016020|GO:0016757
Aed5g1165 396 PANTHER OS01G0201100 PROTEIN 237 396 - -
Aed5g1165 396 PANTHER GLYCOSYLTRANSFERASE 5 238 IPR044610 GO:0015020
Aed5g1165 396 PANTHER GLYCOSYLTRANSFERASE 237 396 IPR044610 GO:0015020
Aed5g1165 396 PANTHER OS01G0201100 PROTEIN 5 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1165 Aed-Chr5 10053677 10058318 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1165 2 396 Glycosyltransferase AT3G15350 60.698 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1165 - - gmx:100781728 716.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1165 5 10053677 10058318 Aed5g1165 5 10053677 10058318 ECH