Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1145 ATGGCAATTTGTTCCTCATCTTCTTCTTCTTCTTCTTCTACGTCGTCGTTTGGTTCCTCGACCAGCACCAAGGCGTGGATCGTCCATGGCATATTGGCCGGAGTGGCAATTGCGGCGGCGGTGGGTGCGCGCGCTTACATGGCCCGCTTTCGGAGCCGGGTCGTGGGCATCATACCCGCCCGATTCGCTTCCTCGCGGTTCGAGGGAAAGCCTCTCGTTCAAATCCTTGGCAAGACCATGATCCAGAGAACATGGGAAAGGGCGAAGCTGGCATCTACATTGGATCATGTTGTTGTGGCAACTGATGACGAAAAGATTGCTGATTGCTGTCGACAATTTGGAGCTGATGTTATAATGACAGCAGAATCTTGCAGAAATGGTACTGAGCGCTGCAATGAAGCCCTACAGAAGCTTGGGAAAAAATATGATATTGTTGTCAACATTCAGGGTGATGAGCCACTTATTGATCCTGAGATAATAGATGGTGTTGTGAAAGCTTTGCAGGCAACTCCTGATGCAGTGTTCAGCACTGCAGTCACATCTTTAAAGCCAGAAGATGCACATGATCCAAATAGAGTGAAATGTGTGGTAGATAATCGTGGTTATGCCATTTATTTTTCACGAGGAATAATCCCATTCAACAAGTCAGGGAAGGTCAACCAACAGTTCCCGTATCTGCTACATCTTGGGATTCAGAGCTATGACGCAAAGTTTCTCAAGATATACCCTGATCTTGAACCTACTCCATTGCAACTCGAGGAGGATTTGGAGCAGCTTAAAGTCCTTGAGAATGGCTACAAGATGAAGGTGATAAAAGTTGATCATGAGGCTCATGGTGTTGACACTCCAGAAGATGTTGAAAAGATAGAATCTCTAATGCGTGAGAGGAACTTGTCTTGA 900 0.4644 MAICSSSSSSSSSTSSFGSSTSTKAWIVHGILAGVAIAAAVGARAYMARFRSRVVGIIPARFASSRFEGKPLVQILGKTMIQRTWERAKLASTLDHVVVATDDEKIADCCRQFGADVIMTAESCRNGTERCNEALQKLGKKYDIVVNIQGDEPLIDPEIIDGVVKALQATPDAVFSTAVTSLKPEDAHDPNRVKCVVDNRGYAIYFSRGIIPFNKSGKVNQQFPYLLHLGIQSYDAKFLKIYPDLEPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDTPEDVEKIESLMRERNLS 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1145 299 CDD CMP-KDO-Synthetase 53 292 IPR004528 GO:0008690
Aed5g1145 299 Hamap 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 52 294 IPR004528 GO:0008690
Aed5g1145 299 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 44 294 IPR029044 -
Aed5g1145 299 PANTHER 3-DEOXY-MANNO-OCTULOSONATE CYTIDYLYLTRANSFERASE 18 299 - -
Aed5g1145 299 PANTHER BNAA05G35640D PROTEIN 18 299 - -
Aed5g1145 299 TIGRFAM kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 56 287 IPR004528 GO:0008690
Aed5g1145 299 SUPERFAMILY Nucleotide-diphospho-sugar transferases 54 296 IPR029044 -
Aed5g1145 299 Pfam Cytidylyltransferase 56 266 IPR003329 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1145 K00979 - gmx:100818593 512.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1145 5 9803860 9813273 Aed5g1145 5 9803860 9813273 ECH