Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1117 ATGGAGGAGGACAATTACGCGAAGGAATTGGAAGTGGCCGTTAGGGTGGTCCACGTGGCGTGTGCTCTCTGCGGGAGGGTGCAGGAGAGGCTCCTCGCCACCACCAATGATCACGTTCTGTCCAAGGATGATGATTCTCCCGTTACTGTTGCAGACTTTAGTGTTCAAGCAATTATTAGTTGGTTACTATCAAAAATTTTCGGGGTTCAAAACGTGTCAATTGTTGCCGAAGAAGACATACAAACCATCTCCAAGGATGAATCAGCAGGCTTACTGGAAGCTATTGTGAATACCGTGAATGAGTCTTTAGCTTTTGCATCCAAATATGGTCTTCAAAGTCCGGAAACAACTCTAGGGTCATCTGAAGTTCTTGAGGCCATTGGCCGTTGCAACTCAACCGGAGGCCCTAGTGGAAGATATTGGGTACTTGACCCTGTTGATGGCACATTAGGATTCGTACGTGGGGATCAATATGCGGTTGCTCTAGCTCTGATTGAGGATGGAAAAGTTGTTCTTGGAGTTCTGGGGTGTCCTAATTACCCAGTAAAGACAGAATGGCTTAATTATCAAACTAAGCCAGAATCGCCTCTAACAACTCCTAATACCGGGGGGAAAGGATGTGTATTGTATGCAAGAAAAGGCAGCGGTGAGGCATGGTTCCAGTCATTAATTGATGGAGATAACATGCTAGAATGGCCAAATTGTGCTAGACTTATTCGTGTTTCTTCAATTGATGATCCGGCATTGGCAACTCTTTGCGAACCAGTGGAAAGGGCAAACTCAAACCATTCATTCACGGCTGGACTCGCTCACAGTGTGGGACTTAGAAAACAGCCCTTGCGCGTGCACAGCATGGTAAAATACGCAGCAATAGCCCGGGGAGACGCAGAGATATTCATGAAATTCGCAAAGTGCGGCTACAAGGAGAAGATATGGGATCACGCTGCTGGTGTCGTCATTGTCGAGGAGGCTGGTGGCGTGGTAACTGATGCCGGAGGCCGCCCTCTGGACTTCTCGAAGGGAATGTACTTGGAAGGTCTTGACAGAGGCATCATTGCATGCTCTGGTGTCACTTTGCATGAAAAATTAATTGGTGCTGTTTATGCTAGCTGGGACTCCTCAAATTTATGA 1131 0.4721 MEEDNYAKELEVAVRVVHVACALCGRVQERLLATTNDHVLSKDDDSPVTVADFSVQAIISWLLSKIFGVQNVSIVAEEDIQTISKDESAGLLEAIVNTVNESLAFASKYGLQSPETTLGSSEVLEAIGRCNSTGGPSGRYWVLDPVDGTLGFVRGDQYAVALALIEDGKVVLGVLGCPNYPVKTEWLNYQTKPESPLTTPNTGGKGCVLYARKGSGEAWFQSLIDGDNMLEWPNCARLIRVSSIDDPALATLCEPVERANSNHSFTAGLAHSVGLRKQPLRVHSMVKYAAIARGDAEIFMKFAKCGYKEKIWDHAAGVVIVEEAGGVVTDAGGRPLDFSKGMYLEGLDRGIIACSGVTLHEKLIGAVYASWDSSNL 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1117 376 CDD PAP_phosphatase 9 369 - -
Aed5g1117 376 ProSitePatterns Inositol monophosphatase family signature 1. 141 154 IPR020583 -
Aed5g1117 376 Gene3D - 240 370 - -
Aed5g1117 376 PANTHER PHOSPHATASE 1 376 - -
Aed5g1117 376 PANTHER PAP-SPECIFIC PHOSPHATASE HAL2-LIKE 1 376 - -
Aed5g1117 376 SUPERFAMILY Carbohydrate phosphatase 5 369 - -
Aed5g1117 376 ProSitePatterns Inositol monophosphatase family signature 2. 312 326 IPR020550 GO:0046854
Aed5g1117 376 Gene3D - 5 230 - -
Aed5g1117 376 TIGRFAM bisphos_HAL2: 3'(2'),5'-bisphosphate nucleotidase 6 375 IPR006239 GO:0006790|GO:0008441
Aed5g1117 376 Pfam Inositol monophosphatase family 44 371 IPR000760 GO:0046855
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1117 Aed-Chr5 9466986 9472260 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1117 K01082 - gmx:100814009 703.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1117 5 9466986 9472260 Aed5g1117 5 9466986 9472260 ECH